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Literature summary for 3.4.21.6 extracted from

  • Singh, N.; Briggs, J.M.
    Molecular dynamics simulations of Factor Xa: insight into conformational transition of its binding subsites (2008), Biopolymers, 89, 1104-1113.
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

Crystallization (Comment) Organism
20 ns of molecular dynamics and steered molecular dynamics simulations on open and closed conformation, based on crystal structure PBD entry 1C5M. Interchangeable conformational transition between open and closed form. The opening and closing dynamics of the FXa subsites involve potential mechanistic roles of residues Glu97, Lys96, and aromatic-aromatic interactions of various aromatic residues His57, Tyr60, Phe94, Tyr99, Phe194, and Trp215 Homo sapiens

Organism

Organism UniProt Comment Textmining
Homo sapiens P00742
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