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Literature summary for 3.1.21.7 extracted from

  • Nawaz, M.S.; Vik, E.S.; Ronander, M.E.; Solvoll, A.M.; Blicher, P.; Bjoras, M.; Alseth, I.; Dalhus, B.
    Crystal structure and MD simulation of mouse EndoV reveal wedge motif plasticity in this inosine-specific endonuclease (2016), Sci. Rep., 6, 24979 .
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in a modified version of Escherichia coli ER 2566 (ER2566DELTAnfiDELTArnhB) where the endogenous nfi and rnhB genes have been inactivated by transformation with the kanamycin-deletion cassettes derived from the JW5547-1 (nfi::kan) and JW0178-1 (rnhB::kan) strains. For crystallisation, a site specific (D52A) truncated (residues 1-250) mutant of mEndoV is fused to His/MBP in pETM41 is expressed in BL21 CodonPlus(DE3)-RIPL Escherichia coli cells Mus musculus

Crystallization (Commentary)

Crystallization (Comment) Organism
-
Mus musculus

Protein Variants

Protein Variants Comment Organism
D52A mutant enzyme totally loses the inosine-RNA incision activity Mus musculus

Inhibitors

Inhibitors Comment Organism Structure
Mn2+ at pH 8.5, a Mn2+ concentration of 2.5 mM and higher inhibits activity Mus musculus

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ best activity at pH 8.5 and 2.5 mM Mg2+ Mus musculus

Organism

Organism UniProt Comment Textmining
Mus musculus Q8C9A2
-
-

Purification (Commentary)

Purification (Comment) Organism
-
Mus musculus

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ACUGGACA[rI][rI]U[rI]CUCCGAGG + H2O
-
Mus musculus ?
-
?
RNA + H2O the enzyme is active on RNA substrates containing one or several inosines. It does not cleave at inosines in DNA Mus musculus ?
-
?

Synonyms

Synonyms Comment Organism
EndoV
-
Mus musculus

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.0026
-
ACUGGACA[rI][rI]U[rI]CUCCGAGG pH 7.5, 37°C Mus musculus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
8.5
-
-
Mus musculus