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Literature summary for 3.1.11.5 extracted from

  • Burgers, P.M.J.; Bauer, G.A.; Tam, L.
    Exonuclease V from Saccharomyces cerevisiae. A 5-3-deoxyribonuclease that produces dinucleotides in a sequential fashion (1988), J. Biol. Chem., 263, 8099-8105.
    View publication on PubMed

Inhibitors

Inhibitors Comment Organism Structure
NaCl
-
Saccharomyces cerevisiae

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.007
-
oligonucleotide (polydT)8 polydA
-
Saccharomyces cerevisiae

Localization

Localization Comment Organism GeneOntology No. Textmining
nucleus
-
Saccharomyces cerevisiae 5634
-

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required, optimal concentration around 3-12 mM Saccharomyces cerevisiae

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
99000
-
sedimentation, calculated Saccharomyces cerevisiae

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
single stranded DNA + H2O Saccharomyces cerevisiae
-
5'-phosphomonoester oligonucleotides
-
?

Organism

Organism UniProt Comment Textmining
Saccharomyces cerevisiae
-
yeast
-

Purification (Commentary)

Purification (Comment) Organism
partial Saccharomyces cerevisiae

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
oligonucleotide (polydT)8 polydA + H2O
-
Saccharomyces cerevisiae ?
-
?
single stranded DNA + H2O
-
Saccharomyces cerevisiae 5'-phosphomonoester oligonucleotides
-
?
single stranded DNA + H2O no endonuclease activity Saccharomyces cerevisiae 5'-phosphomonoester oligonucleotides
-
?
single stranded DNA + H2O degrades only single stranded DNA from 5'-end Saccharomyces cerevisiae 5'-phosphomonoester oligonucleotides
-
?
single stranded DNA + H2O not ATP dependent Saccharomyces cerevisiae 5'-phosphomonoester oligonucleotides
-
?

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.8
-
-
Saccharomyces cerevisiae