Any feedback?
Please rate this page
(literature.php)
(0/150)

BRENDA support

Literature summary for 3.1.1.11 extracted from

  • Rajulapati, V.; Sharma, K.; Dhillon, A.; Goyal, A.
    SAXS and homology modelling based structure characterization of pectin methylesterase a family 8 carbohydrate esterase from Clostridium thermocellum ATCC 27405 (2018), Arch. Biochem. Biophys., 641, 39-49 .
    View publication on PubMed
Search for more literature for 3.1.1.11

Cloned(Commentary)

Cloned (Comment) Organism
gene Cthe_2949, sequence comparisons and phylogenetic analysis Acetivibrio thermocellus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
pectin + n H2O Acetivibrio thermocellus
-
 n methanol + pectate
-
 ?
pectin + n H2O Acetivibrio thermocellus DSM 1237
-
 n methanol + pectate
-
 ?
pectin + n H2O Acetivibrio thermocellus NBRC 103400
-
 n methanol + pectate
-
 ?
pectin + n H2O Acetivibrio thermocellus ATCC 27405
-
 n methanol + pectate
-
 ?
pectin + n H2O Acetivibrio thermocellus VPI 7372
-
 n methanol + pectate
-
 ?
pectin + n H2O Acetivibrio thermocellus NCIMB 10682
-
 n methanol + pectate
-
 ?
pectin + n H2O Acetivibrio thermocellus NRRL B-4536
-
 n methanol + pectate
-
 ?

Organism

Organism UniProt Comment Textmining
Acetivibrio thermocellus A3DJL8
-
-
Acetivibrio thermocellus ATCC 27405 A3DJL8
-
-
Acetivibrio thermocellus DSM 1237 A3DJL8
-
-
Acetivibrio thermocellus NBRC 103400 A3DJL8
-
-
Acetivibrio thermocellus NCIMB 10682 A3DJL8
-
-
Acetivibrio thermocellus NRRL B-4536 A3DJL8
-
-
Acetivibrio thermocellus VPI 7372 A3DJL8
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
pectin + n H2O
-
 Acetivibrio thermocellus n methanol + pectate
-
 ?
pectin + n H2O
-
 Acetivibrio thermocellus DSM 1237 n methanol + pectate
-
 ?
pectin + n H2O
-
 Acetivibrio thermocellus NBRC 103400 n methanol + pectate
-
 ?
pectin + n H2O
-
 Acetivibrio thermocellus ATCC 27405 n methanol + pectate
-
 ?
pectin + n H2O
-
 Acetivibrio thermocellus VPI 7372 n methanol + pectate
-
 ?
pectin + n H2O
-
 Acetivibrio thermocellus NCIMB 10682 n methanol + pectate
-
 ?
pectin + n H2O
-
 Acetivibrio thermocellus NRRL B-4536 n methanol + pectate
-
 ?

Subunits

Subunits Comment Organism
More analysis of secondary structure of CtPME shows alpha-helices (3.1%), beta-sheets (40.1%) and random coils (56.9%). Three-dimensional enzyme structure analysis and structure comparisons, overview Acetivibrio thermocellus

Synonyms

Synonyms Comment Organism
Cthe_2949
-
 Acetivibrio thermocellus
CtPME
-
 Acetivibrio thermocellus
PME
-
 Acetivibrio thermocellus
psectin methylesterase
-
 Acetivibrio thermocellus

General Information

General Information Comment Organism
evolution the enzyme belongs to the family 8 of carbohydrate esterases (CE8) of the pectin methylesterase superfamily Acetivibrio thermocellus
additional information analysis of the conserved and semi-conserved amino acid residues, homology modelling of CtPME structure reveals a characteristic right handed parallel alpha-helices, structure comparisons, overview. Molecular dynamic simulation of CtPME modelled structure, docking study of CtPME. Active site and ligand binding structures Acetivibrio thermocellus