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Literature summary for 3.1.1.11 extracted from
- Isolation of nine Phytophthora capsici pectin methylesterase genes which are differentially expressed in various plant species (2011), J. Basic Microbiol., 51, 61-70.
Molecular Weight [Da]
| Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
|---|---|---|---|
| 36200 | - |
x * 36200, isoform PME3, calculated from amino acid sequence | Phytophthora capsici |
| 36900 | - |
x * 36900, isoform PME2, calculated from amino acid sequence | Phytophthora capsici |
| 37700 | - |
x * 37700, isoform PME1, calculated from amino acid sequence | Phytophthora capsici |
| 37700 | - |
x * 37700, isoform PME7, calculated from amino acid sequence | Phytophthora capsici |
| 37700 | - |
x * 37700, isoform PME9, calculated from amino acid sequence | Phytophthora capsici |
| 37800 | - |
x * 37800, isoform PME8, calculated from amino acid sequence | Phytophthora capsici |
| 37900 | - |
x * 37900, isoform PME5, calculated from amino acid sequence | Phytophthora capsici |
| 38100 | - |
x * 38100, isoform PME4, calculated from amino acid sequence | Phytophthora capsici |
| 38200 | - |
x * 38200, isoform PME6, calculated from amino acid sequence | Phytophthora capsici |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Phytophthora capsici | F4MIB0 | isoform PME6 | - |
| Phytophthora capsici | G2XK68 | isoform PME1 | - |
| Phytophthora capsici | G2XKU9 | isoform PME2 | - |
| Phytophthora capsici | G2XKV0 | isoform PME3 | - |
| Phytophthora capsici | G2XKV1 | isoform PME4 | - |
| Phytophthora capsici | G2XKV2 | isoform PME5 | - |
| Phytophthora capsici | G2XKV3 | isoform PME7 | - |
| Phytophthora capsici | G2XKV4 | isoform PME8 | - |
| Phytophthora capsici | G2XKV5 | isoform PME9 | - |
| Phytophthora capsici SD33 | F4MIB0 | isoform PME6 | - |
| Phytophthora capsici SD33 | G2XK68 | isoform PME1 | - |
| Phytophthora capsici SD33 | G2XKU9 | isoform PME2 | - |
| Phytophthora capsici SD33 | G2XKV0 | isoform PME3 | - |
| Phytophthora capsici SD33 | G2XKV1 | isoform PME4 | - |
| Phytophthora capsici SD33 | G2XKV2 | isoform PME5 | - |
| Phytophthora capsici SD33 | G2XKV3 | isoform PME7 | - |
| Phytophthora capsici SD33 | G2XKV4 | isoform PME8 | - |
| Phytophthora capsici SD33 | G2XKV5 | isoform PME9 | - |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| pectin + H2O | - |
Phytophthora capsici | methanol + pectate | - |
? |  |
| pectin + H2O | - |
Phytophthora capsici SD33 | methanol + pectate | - |
? | |
Subunits
| Subunits | Comment | Organism |
|---|---|---|
| ? | x * 36200, isoform PME3, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 36900, isoform PME2, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 37700, isoform PME1, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 37700, isoform PME7, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 37700, isoform PME9, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 37800, isoform PME8, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 37900, isoform PME5, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 38100, isoform PME4, calculated from amino acid sequence | Phytophthora capsici |
| ? | x * 38200, isoform PME6, calculated from amino acid sequence | Phytophthora capsici |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| pectin methylesterase | - |
Phytophthora capsici |
| PME1 | isoform | Phytophthora capsici |
| PME2 | isoform | Phytophthora capsici |
| PME3 | isoform | Phytophthora capsici |
| PME4 | isoform | Phytophthora capsici |
| PME5 | isoform | Phytophthora capsici |
| PME6 | isoform | Phytophthora capsici |
| PME7 | isoform | Phytophthora capsici |
| PME8 | isoform | Phytophthora capsici |
| PME9 | isoform | Phytophthora capsici |
Expression
| Organism | Comment | Expression |
|---|---|---|
| Phytophthora capsici | most pectin methylesterase genes from Phytophthora capsici present a decreasing trend of expression from 1 to 5 dpi in tomato fruits. In cucumber fruits, expression levels decrease from 5 to 7 dpi | down |
| Phytophthora capsici | the expression levels of the pectin methylesterase genes from Phytophthora capsici increase from 1 to 7 dpi in pepper. In fruits from pepper and tomato fruits, peaks are reached at 7 dpi. In cucumber fruits, each gene shows minor expression levels from 1 to 3 dpi and exhibits definite peaks at 5 dpi | up |
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