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Literature summary for 2.7.4.6 extracted from

  • Yonezawa, Y.; Nagayama, A.; Tokunaga, H.; Ishibashi, M.; Arai, S.; Kuroki, R.; Watanabe, K.; Arakawa, T.; Tokunaga, M.
    Nucleoside diphosphate kinase from psychrophilic Pseudoalteromonas sp. AS-131 isolated from antarctic ocean (2015), Protein J., 34, 275-283.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
gene ndk, recombinant expression in Escherichia coli strain BL21Star(DE3) Pseudoalteromonas sp.

Protein Variants

Protein Variants Comment Organism
D135A/E136T site-directed mutagenesis Pseudoalteromonas sp.

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required Pseudoalteromonas sp.

Organism

Organism UniProt Comment Textmining
Pseudoalteromonas sp.
-
isolated from antarctic ocean
-
Pseudoalteromonas sp. AS-131
-
isolated from antarctic ocean
-

Purification (Commentary)

Purification (Comment) Organism
recombinant enzyme from Escherichia coli strain BL21Star(DE3) to homogeneity by ATP affinity chromatography and dialysis Pseudoalteromonas sp.

Subunits

Subunits Comment Organism
dimer tertiary structure homology modelling of wild-type and mutant enzymes using the tetrameric structure of mutagenized HaNDK, PDB ID 3VGU Pseudoalteromonas sp.

Synonyms

Synonyms Comment Organism
ASNDK
-
Pseudoalteromonas sp.
nucleoside diphosphate kinase
-
Pseudoalteromonas sp.

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
20
-
recombinant enzyme Pseudoalteromonas sp.

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
20 50 decrease in Kcat/Km with increasing temperature from 20°C to 37°C, inactivation at 50°C Pseudoalteromonas sp.

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
20 37 degeneration during recombinant expression at 37°C, decrease in Kcat/Km with increasing temperature from 20°C to 37°C, Tm is 38°C, inactivation of purified enzyme at 50°C Pseudoalteromonas sp.

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
8
-
assay at Pseudoalteromonas sp.