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Literature summary for 2.7.4.6 extracted from

  • Ishibashi, M.; Sakashita, K.; Tokunaga, H.; Arakawa, T.; Tokunaga, M.
    Activation of halophilic nucleoside diphosphate kinase by a non-ionic osmolyte, trimethylamine N-oxide (2003), J. Protein Chem., 22, 345-351.
    View publication on PubMed

Activating Compound

Activating Compound Comment Organism Structure
Trimethylamine N-oxide concentration of 4 M required for activity, at pH 8 inclusion of low concentrations of NaCl required for activation Halobacterium salinarum

Metals/Ions

Metals/Ions Comment Organism Structure
KCl concentration of 3 M required for activity Halobacterium salinarum
NaCl concentration of 2 M required for activity Halobacterium salinarum

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + NDP Halobacterium salinarum contributes to the maintenance of the cellular pools of all nucleosides triphosphates ADP + NTP
-
?
ATP + NDP Halobacterium salinarum 4R contributes to the maintenance of the cellular pools of all nucleosides triphosphates ADP + NTP
-
?

Organism

Organism UniProt Comment Textmining
Halobacterium salinarum
-
-
-
Halobacterium salinarum 4R
-
-
-

Purification (Commentary)

Purification (Comment) Organism
-
Halobacterium salinarum

Renatured (Commentary)

Renatured (Comment) Organism
extremely halophilic enzyme inactivated at low salt concentrations using heat-treatment or 6 M urea, addition of or dialysis against 2 M NaCl, 3 M KCl, or 4 M trimethylamine N-oxide required for effective refolding of enzyme, refolding using 4 M trimethylamine N-oxide is strongly pH-dependent, good refolding at pH 7, almost no activity regained at pH 8, at pH 8 inclusion of low concentrations of NaCl supports refolding and activation of activity Halobacterium salinarum

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + NDP
-
Halobacterium salinarum ADP + NTP
-
?
ATP + NDP contributes to the maintenance of the cellular pools of all nucleosides triphosphates Halobacterium salinarum ADP + NTP
-
?
ATP + NDP
-
Halobacterium salinarum 4R ADP + NTP
-
?
ATP + NDP contributes to the maintenance of the cellular pools of all nucleosides triphosphates Halobacterium salinarum 4R ADP + NTP
-
?