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Literature summary for 2.7.1.71 extracted from

  • Nugroho, W.S.; Kim, D.W.; Han, J.C.; Hur, Y.B.; Nam, S.W.; Kim, H.J.
    Cloning, expression, and characterization of a cold-adapted shikimate kinase from the psychrophilic bacterium Colwellia psychrerythraea 34H (2016), J. Microbiol. Biotechnol., 26, 2087-2097 .
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3) cells Colwellia psychrerythraea
expressed in Escherichia coli BL21(DE3) cells Escherichia coli

General Stability

General Stability Organism
the urea concentration required for half-maximal denaturation is 1.5 mM Colwellia psychrerythraea
the urea concentration required for half-maximal denaturation is 2.5 mM Escherichia coli

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.1
-
shikimate at pH 7.5 and 25°C Colwellia psychrerythraea
0.153
-
ATP at pH 7.5 and 25°C Colwellia psychrerythraea
0.362
-
shikimate at pH 7.5 and 25°C Escherichia coli
0.5
-
ATP at pH 7.5 and 25°C Escherichia coli

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ 15 mM used in assay conditions Colwellia psychrerythraea
Mg2+ 15 mM used in assay conditions Escherichia coli

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + shikimate Colwellia psychrerythraea
-
ADP + 3-phosphoshikimate
-
r
ATP + shikimate Escherichia coli
-
ADP + 3-phosphoshikimate
-
r

Organism

Organism UniProt Comment Textmining
Colwellia psychrerythraea
-
-
-
Escherichia coli P0A6D7
-
-

Purification (Commentary)

Purification (Comment) Organism
His-Bind agarose resin column chromatography Colwellia psychrerythraea
His-Bind agarose resin column chromatography Escherichia coli

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + shikimate
-
Colwellia psychrerythraea ADP + 3-phosphoshikimate
-
r
ATP + shikimate
-
Escherichia coli ADP + 3-phosphoshikimate
-
r

Subunits

Subunits Comment Organism
? x * about 20000, SDS-PAGE Colwellia psychrerythraea
? x * about 20000, SDS-PAGE Escherichia coli
? x * 19490, calculated from amino acid sequence Colwellia psychrerythraea

Synonyms

Synonyms Comment Organism
AroK
-
Colwellia psychrerythraea
AroK
-
Escherichia coli

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
-
Colwellia psychrerythraea
40
-
-
Escherichia coli

Temperature Range [°C]

Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
10 40 the enzyme retains about 40% of its maximal activity at 10°C and 40°C Colwellia psychrerythraea
15 40 the enzyme retains about 40% of its maximal activity at 15°C and 40°C Escherichia coli

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
33
-
melting temperature Colwellia psychrerythraea
45
-
melting temperature Escherichia coli

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
28.8
-
shikimate at pH 7.5 and 25°C Colwellia psychrerythraea
32.8
-
ATP at pH 7.5 and 25°C Colwellia psychrerythraea
55.86
-
shikimate at pH 7.5 and 25°C Escherichia coli
122.51
-
ATP at pH 7.5 and 25°C Escherichia coli

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
154
-
shikimate at pH 7.5 and 25°C Escherichia coli
214
-
ATP at pH 7.5 and 25°C Colwellia psychrerythraea
245
-
ATP at pH 7.5 and 25°C Escherichia coli
288
-
shikimate at pH 7.5 and 25°C Colwellia psychrerythraea