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Literature summary for 2.7.1.71 extracted from

  • Kumar, M.; Verma, S.; Sharma, S.; Srinivasan, A.; Singh, T.P.; Kaur, P.
    Structure-based in silico design of a high-affinity dipeptide inhibitor for novel protein drug target shikimate kinase of Mycobacterium tuberculosis (2010), Chem. Biol. Drug Des., 76, 277-284.
    View publication on PubMed

Application

Application Comment Organism
drug development the enzyme is an attractive drug target as it is vital for the survival of Mycobacterium tuberculosis but absent in mammalian hosts Mycobacterium tuberculosis

Inhibitors

Inhibitors Comment Organism Structure
asxe1
-
Mycobacterium tuberculosis
additional information screening for the dipeptide inhibitor using in silico structure-based design approach, docking analysis, overview Mycobacterium tuberculosis

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required Mycobacterium tuberculosis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + shikimate Mycobacterium tuberculosis
-
ADP + 3-phosphoshikimate
-
?

Organism

Organism UniProt Comment Textmining
Mycobacterium tuberculosis
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + shikimate
-
Mycobacterium tuberculosis ADP + 3-phosphoshikimate
-
?

Cofactor

Cofactor Comment Organism Structure
ATP
-
Mycobacterium tuberculosis

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
0.000005
-
asxe1 pH and temperature not specified in the publication Mycobacterium tuberculosis

General Information

General Information Comment Organism
additional information shikimate binding to the enzyme, docking analysis, conformation of ternary dead-end enzyme-shikimate-ADP complex, molecular dynamics simulation of a fully hydrated model of the docked complex, overview Mycobacterium tuberculosis
physiological function shikimate kinase is vital for the survival of Mycobacterium tuberculosis Mycobacterium tuberculosis