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Literature summary for 2.5.1.29 extracted from

  • Ament, K.; Van Schie, C.C.; Bouwmeester, H.J.; Haring, M.A.; Schuurink, R.C.
    Induction of a leaf specific geranylgeranyl pyrophosphate synthase and emission of (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene in tomato are dependent on both jasmonic acid and salicylic acid signaling pathways (2006), Planta, 224, 1197-1208.
    View publication on PubMed

Activating Compound

Activating Compound Comment Organism Structure
additional information isozyme GGPS1 expression is induced in leaves by spider mite Tetranychus urticae feeding and mechanical wounding in wild type tomato but not in the jasmonic acid-response mutant def-1 and the salicylic acid-deficient transgenic NahG line, overview Solanum lycopersicum
additional information isozyme GGPS2 is not induced in leaves by spider mite-feeding, wounding, jasmonic acid or methyl salicylate, overview Solanum lycopersicum

Cloned(Commentary)

Cloned (Comment) Organism
gene GGPS1, DNA and amino acid sequence determination and analysis, expression analysis, phylogenetic analysis Solanum lycopersicum
gene GGPS2, DNA and amino acid sequence determination and analysis, expression analysis, phylogenetic analysis Solanum lycopersicum

Protein Variants

Protein Variants Comment Organism
additional information isozyme GGPS1 expression is induced in leaves by spider mite Tetranychus urticae feeding and mechanical wounding in wild type tomato but not in the jasmonic acid-response mutant def-1 and the salicylic acid-deficient transgenic NahG line, isozyme GGPS2 is not induced in leaves by spider mite-feeding, wounding, jasmonic acid or methyl salicylate, overview Solanum lycopersicum
additional information isozyme GGPS1 expression is induced in leaves by spider mite Tetranychus urticae feeding and mechanical wounding in wild type tomato but not in the jasmonic acid-response mutant def-1 and the salicylic acid-deficient transgenic NahG line, overview Solanum lycopersicum

Localization

Localization Comment Organism GeneOntology No. Textmining
chloroplast
-
Solanum lycopersicum 9507
-

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+
-
Solanum lycopersicum

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
39000
-
x * 39000, about, isozyme GGPPS2, sequence calculation Solanum lycopersicum
39900
-
x * 39900, about, isozyme GGPPS1, sequence calculation Solanum lycopersicum

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Solanum lycopersicum emission of the GGPP-derived volatile terpenoid (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene correlates with expression of GGPS1 ?
-
?
trans,trans-farnesyl diphosphate + isopentenyl diphosphate Solanum lycopersicum
-
diphosphate + geranylgeranyl diphosphate
-
?

Organism

Organism UniProt Comment Textmining
Solanum lycopersicum Q1A7S9 GGPPS2; cv. Castlemart, genes/isozymes GGPS1 and GGPS2
-
Solanum lycopersicum Q1A7T0 GGPPS1; cv. Castlemart, genes/isozymes GGPS1 and GGPS2
-

Source Tissue

Source Tissue Comment Organism Textmining
flower predominantly isozyme GGPS2 Solanum lycopersicum
-
fruit ripening, predominantly isozyme GGPS2 Solanum lycopersicum
-
leaf predominantly isozyme GGPS1 Solanum lycopersicum
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
additional information
-
-
Solanum lycopersicum

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information emission of the GGPP-derived volatile terpenoid (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene correlates with expression of GGPS1 Solanum lycopersicum ?
-
?
trans,trans-farnesyl diphosphate + isopentenyl diphosphate
-
Solanum lycopersicum diphosphate + geranylgeranyl diphosphate
-
?

Subunits

Subunits Comment Organism
? x * 39000, about, isozyme GGPPS2, sequence calculation Solanum lycopersicum
? x * 39900, about, isozyme GGPPS1, sequence calculation Solanum lycopersicum

Synonyms

Synonyms Comment Organism
GGPP synthase
-
Solanum lycopersicum
leaf-specific geranylgeranyl pyrophosphate synthase
-
Solanum lycopersicum
More the enzyme belongs to a group of short-chain prenyltransferases Solanum lycopersicum

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
assay at Solanum lycopersicum

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
8
-
assay at Solanum lycopersicum