Cloned (Comment) | Organism |
---|---|
gene SlCPT1, located on chromosome 8, and other gene of the CPT gene family, DNA and amino acid sequence determination and analysis, phylogenetic analysis | Solanum lycopersicum |
Protein Variants | Comment | Organism |
---|---|---|
additional information | constitutive and trichome-specific RNAi-mediated knockdown of NDPS1, RNAi-mediated suppression of NDPS1 with greater reductions achieved with the general 35S promoter compared to the trichome-specific MKS1 promoter, phenotypes, overview | Solanum lycopersicum |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
chloroplast | immunohistochemic analysis | Solanum lycopersicum | 9507 | - |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
dimethylallyl diphosphate + isopentenyl diphosphate | Solanum lycopersicum | - |
diphosphate + neryl diphosphate | - |
? | |
dimethylallyl diphosphate + isopentenyl diphosphate | Solanum lycopersicum MP-1 | - |
diphosphate + neryl diphosphate | - |
? |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Solanum lycopersicum | C1K5M2 | gene SlCPT1 | - |
Solanum lycopersicum MP-1 | C1K5M2 | gene SlCPT1 | - |
Source Tissue | Comment | Organism | Textmining |
---|---|---|---|
additional information | no expression of SlCPT1 in leaves, flowers, roots, and fruits | Solanum lycopersicum | - |
trichome | type VI trichomes of leaves and stems, high expression level of SlCPT1 | Solanum lycopersicum | - |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
dimethylallyl diphosphate + isopentenyl diphosphate | - |
Solanum lycopersicum | diphosphate + neryl diphosphate | - |
? | |
dimethylallyl diphosphate + isopentenyl diphosphate | dimethylallyl diphosphate is the preferred substrate | Solanum lycopersicum | diphosphate + neryl diphosphate | - |
? | |
dimethylallyl diphosphate + isopentenyl diphosphate | - |
Solanum lycopersicum MP-1 | diphosphate + neryl diphosphate | - |
? | |
dimethylallyl diphosphate + isopentenyl diphosphate | dimethylallyl diphosphate is the preferred substrate | Solanum lycopersicum MP-1 | diphosphate + neryl diphosphate | - |
? |
Synonyms | Comment | Organism |
---|---|---|
NDPS1 | - |
Solanum lycopersicum |
neryl diphosphate synthase | - |
Solanum lycopersicum |
short-chain cis-prenyldiphosphate synthase | - |
Solanum lycopersicum |
short-chain CPT | - |
Solanum lycopersicum |
General Information | Comment | Organism |
---|---|---|
evolution | gene SlCPT1 encoding the NDPS1 belongs to the CPT gene family. All the short-chain CPT genes from tomato, i.e. SlCPT1, SlCPT2 and SlCPT6, are closely linked to terpene synthase gene clusters. NDPS1 belongs to the short-chain cis-prenyldiphosphate synthases | Solanum lycopersicum |
malfunction | RNAi-mediated suppression of NDPS1 leads to a large decrease in beta-phellandrene, which is produced from neryl diphosphate | Solanum lycopersicum |
physiological function | NDPS1 catalyzes the formation of NPP, which is used as a substrate by beta-phellandrene synthase 1, PHS1, to produce beta-phellandrene and several other monoterpenes | Solanum lycopersicum |