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Literature summary for 2.5.1.22 extracted from

  • Wu, H.; Min, J.; Zeng, H.; McCloskey, D.E.; Ikeguchi, Y.; Loppnau, P.; Michael, A.J.; Pegg, A.E.; Plotnikov, A.N.
    Crystal structure of human spermine synthase: implications of substrate binding and catalytic mechanism (2008), J. Biol. Chem., 283, 16135-16146.
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

Crystallization (Comment) Organism
in complex with 5'-methylthioadenosine and spermidine and with 5'-methylthioadenosine and spermine. Enzyme is a dimer of two identical subunits. Each monomer has three domains, a C-terminal domain, which contains the active site and is similar in structure to spermidine synthase, a central domain made up of four beta-strands, and an N-terminal domain with remarkable structural similarity to S-adenosylmethionine decarboxylase Homo sapiens

Protein Variants

Protein Variants Comment Organism
D201A 40000fold decrease in ratio kcat/Km value Homo sapiens
D201N 40000fold decrease in ratio kcat/Km value Homo sapiens
D276N 250000fold decrease in ratio kcat/Km value Homo sapiens
E353Q 1000fold decrease in ratio kcat/Km value Homo sapiens
additional information deletion of the N-terminal domain leads to a complete loss of spermine synthase activity Homo sapiens

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
additional information
-
additional information ratio of kcat/Km value of wild-type is 40000 for substrate spermidine, and 71000000 for S-adenosyl-L-methioninamine, respectively Homo sapiens

Organism

Organism UniProt Comment Textmining
Homo sapiens P52788
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
S-adenosyl-L-methioninamine + spermidine
-
Homo sapiens 5'-methylthioadenosine + spermine
-
?

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.0015
-
spermidine mutant D201A, pH 7.5, 37°C Homo sapiens
0.0015
-
spermidine mutant D201N, pH 7.5, 37°C Homo sapiens
0.0022
-
spermidine mutant D276N, pH 7.5, 37°C Homo sapiens
0.64
-
spermidine mutant E353Q, pH 7.5, 37°C Homo sapiens
32
-
spermidine wild-type, pH 7.5, 37°C Homo sapiens