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Literature summary for 2.1.1.37 extracted from

  • Teerawanichpan, P.; Krittanai, P.; Chauvatcharin, N.; Narangajavana, J.
    Purification and characterization of rice DNA methyltransferase (2009), Plant Physiol. Biochem., 47, 671-680.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
gene MET1-1, DNA and amino acid sequence determination and analysis Oryza sativa
gene MET1-2, DNA and amino acid sequence determination and analysis Oryza sativa

Inhibitors

Inhibitors Comment Organism Structure
additional information inhibitory effects by methyl donor analogs, base analogs, cations, and cationic amines on rice DNA MTase; inhibitory effects by methyl donor analogs, base analogs, cations, and cationic amines on rice DNA MTase Oryza sativa

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
additional information
-
additional information kinetics Oryza sativa
0.00263
-
S-adenosyl-L-methionine pH 7.6, 25°C Oryza sativa

Localization

Localization Comment Organism GeneOntology No. Textmining
nucleus DNA MTase is enriched in nuclei Oryza sativa 5634
-

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
160000 170000 gel filtration Oryza sativa

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
DNA + S-adenosyl-L-methionine Oryza sativa
-
DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
-
?

Organism

Organism UniProt Comment Textmining
Oryza sativa B1Q3J6 MET1-2; genes MET1-2
-
Oryza sativa Q7Y1I7 MET1-1; gene MET1-1
-

Purification (Commentary)

Purification (Comment) Organism
native enzyme from nuclear extracts from shoots of 10-day-old rice seedlings, 800fold by anion exchange and heparin affinity chromatography, and gel filtration Oryza sativa

Source Tissue

Source Tissue Comment Organism Textmining
callus
-
Oryza sativa
-
inflorescence
-
Oryza sativa
-
leaf only the OsMET1-1 mRNAis slightly accumulated in young leaves, in which virtually no OsMET1-2 transcripts is detectable Oryza sativa
-
additional information only the OsMET1-1 mRNAis slightly accumulated in young leaves, in which virtually no OsMET1-2 transcripts is detectable Oryza sativa
-
root young Oryza sativa
-
seed DNA MTase activity is remarkably increased during imbibing dry seeds Oryza sativa
-
seedling
-
Oryza sativa
-
shoot
-
Oryza sativa
-

Specific Activity [micromol/min/mg]

Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
0.0013
-
purified enzyme with substrate hemi-methylated DNA substrate poly(dI-mdC)–poly(dI-dC) Oryza sativa

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
DNA + S-adenosyl-L-methionine
-
Oryza sativa DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
-
?
DNA + S-adenosyl-L-methionine substrate is chloroplast DNA, no activity with mitochondrial DNA. Substrate sources are etiolated leaf-rice DNA, dry embryo-rice DNA, 10-day-old shoot-rice DNA, mature leaf-rice DNA. The purified protein prefers hemi-methylated DNA substrate, substrate specificity, the enzyme is specific for d(C-G) sites, overview Oryza sativa DNA containing 5-methylcytosine + S-adenosyl-L-homocysteine
-
?
poly(dG-mdC)-poly(dG-dC) + S-adenosyl-L-methionine
-
Oryza sativa ?
-
?
poly(dI-mdC)-poly(dI-dC) + S-adenosyl-L-methionine
-
Oryza sativa ?
-
?

Synonyms

Synonyms Comment Organism
DNA methyltransferase
-
Oryza sativa
DNA MTase
-
Oryza sativa

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
25
-
-
Oryza sativa

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.6 8
-
Oryza sativa

Cofactor

Cofactor Comment Organism Structure
S-adenosyl-L-methionine
-
Oryza sativa