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Literature summary for 1.3.1.33 extracted from
- Cross-species analysis of protein dynamics associated with hydride and proton transfer in the catalytic cycle of the light-driven enzyme protochlorophyllide oxidoreductase (2016), Biochemistry, 55, 903-913.
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| expressed in Escherichia coli BL21(DE3) pLysS cells | Chlamydomonas reinhardtii |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Zea mays |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Nicotiana tabacum |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Daucus carota |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Physcomitrium patens |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Marchantia paleacea |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Pinus mugo |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Nostoc punctiforme |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Cyanidioschyzon merolae |
| expressed in Escherichia coli BL21(DE3) pLysS cells | Lyngbya majuscula |
Inhibitors
| Inhibitors | Comment | Organism | Structure |
|---|---|---|---|
| protochlorophyllide | - |
Chlamydomonas reinhardtii |  |
| protochlorophyllide | - |
Cyanidioschyzon merolae | |
| protochlorophyllide | - |
Daucus carota | |
| protochlorophyllide | - |
Lyngbya majuscula | |
| protochlorophyllide | - |
Marchantia paleacea | |
| protochlorophyllide | - |
Nicotiana tabacum | |
| protochlorophyllide | - |
Nostoc punctiforme | |
| protochlorophyllide | - |
Physcomitrium patens | |
| protochlorophyllide | - |
Pinus mugo | |
| protochlorophyllide | - |
Zea mays | |
KM Value [mM]
| KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 0.0012 | - |
protochlorophyllide | pH and temperature not specified in the publication | Cyanidioschyzon merolae | |
| 0.0013 | - |
NADPH | pH and temperature not specified in the publication | Zea mays | |
| 0.0017 | - |
protochlorophyllide | pH and temperature not specified in the publication | Chlamydomonas reinhardtii | |
| 0.002 | - |
protochlorophyllide | pH and temperature not specified in the publication | Nostoc punctiforme | |
| 0.0022 | - |
NADPH | pH and temperature not specified in the publication | Physcomitrium patens | |
| 0.0023 | - |
protochlorophyllide | pH and temperature not specified in the publication | Physcomitrium patens | |
| 0.0023 | - |
protochlorophyllide | pH and temperature not specified in the publication | Marchantia paleacea | |
| 0.0024 | - |
protochlorophyllide | pH and temperature not specified in the publication | Pinus mugo | |
| 0.0043 | - |
protochlorophyllide | pH and temperature not specified in the publication | Nicotiana tabacum | |
| 0.0048 | - |
NADPH | pH and temperature not specified in the publication | Nostoc punctiforme | |
| 0.0055 | - |
protochlorophyllide | pH and temperature not specified in the publication | Daucus carota | |
| 0.0059 | - |
NADPH | pH and temperature not specified in the publication | Nicotiana tabacum | |
| 0.0077 | - |
protochlorophyllide | pH and temperature not specified in the publication | Zea mays | |
| 0.0078 | - |
protochlorophyllide | pH and temperature not specified in the publication | Lyngbya majuscula | |
| 0.0098 | - |
NADPH | pH and temperature not specified in the publication | Pinus mugo | |
| 0.0578 | - |
NADPH | pH and temperature not specified in the publication | Lyngbya majuscula | |
| 0.124 | - |
NADPH | pH and temperature not specified in the publication | Daucus carota | |
| 0.138 | - |
NADPH | pH and temperature not specified in the publication | Marchantia paleacea | |
| 0.157 | - |
NADPH | pH and temperature not specified in the publication | Chlamydomonas reinhardtii | |
| 0.172 | - |
NADPH | pH and temperature not specified in the publication | Cyanidioschyzon merolae | |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| protochlorophyllide + NADPH + H+ | Chlamydomonas reinhardtii | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Zea mays | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Nicotiana tabacum | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Daucus carota | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Physcomitrium patens | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Marchantia paleacea | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Pinus mugo | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Nostoc punctiforme | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Cyanidioschyzon merolae | - |
chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | Lyngbya majuscula | - |
chlorophyllide a + NADP+ | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Chlamydomonas reinhardtii | - |
- |
- |
| Cyanidioschyzon merolae | - |
- |
- |
| Daucus carota | - |
- |
- |
| Lyngbya majuscula | - |
- |
- |
| Marchantia paleacea | - |
- |
- |
| Nicotiana tabacum | - |
- |
- |
| Nostoc punctiforme | - |
- |
- |
| Physcomitrium patens | - |
- |
- |
| Pinus mugo | - |
- |
- |
| Zea mays | - |
- |
- |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| protochlorophyllide + NADPH + H+ | - |
Chlamydomonas reinhardtii | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Zea mays | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Nicotiana tabacum | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Daucus carota | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Physcomitrium patens | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Marchantia paleacea | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Pinus mugo | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Nostoc punctiforme | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Cyanidioschyzon merolae | chlorophyllide a + NADP+ | - |
? | |
| protochlorophyllide + NADPH + H+ | - |
Lyngbya majuscula | chlorophyllide a + NADP+ | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Chlamydomonas reinhardtii |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Zea mays |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Nicotiana tabacum |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Daucus carota |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Physcomitrium patens |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Marchantia paleacea |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Pinus mugo |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Nostoc punctiforme |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Cyanidioschyzon merolae |
| light-driven enzyme protochlorophyllide oxidoreductase | - |
Lyngbya majuscula |
| POR | - |
Chlamydomonas reinhardtii |
| POR | - |
Zea mays |
| POR | - |
Nicotiana tabacum |
| POR | - |
Daucus carota |
| POR | - |
Physcomitrium patens |
| POR | - |
Marchantia paleacea |
| POR | - |
Pinus mugo |
| POR | - |
Nostoc punctiforme |
| POR | - |
Cyanidioschyzon merolae |
| POR | - |
Lyngbya majuscula |
Turnover Number [1/s]
| Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 0.017 | - |
NADPH | pH and temperature not specified in the publication | Nicotiana tabacum | |
| 0.019 | - |
NADPH | pH and temperature not specified in the publication | Physcomitrium patens | |
| 0.019 | - |
NADPH | pH and temperature not specified in the publication | Marchantia paleacea | |
| 0.02 | - |
NADPH | pH and temperature not specified in the publication | Pinus mugo | |
| 0.026 | - |
NADPH | pH and temperature not specified in the publication | Zea mays | |
| 0.035 | - |
NADPH | pH and temperature not specified in the publication | Nostoc punctiforme | |
| 0.042 | - |
NADPH | pH and temperature not specified in the publication | Cyanidioschyzon merolae | |
| 0.043 | - |
NADPH | pH and temperature not specified in the publication | Chlamydomonas reinhardtii | |
| 0.058 | - |
NADPH | pH and temperature not specified in the publication | Daucus carota | |
| 0.102 | - |
NADPH | pH and temperature not specified in the publication | Lyngbya majuscula | |
Cofactor
| Cofactor | Comment | Organism | Structure |
|---|---|---|---|
| NADPH | - |
Chlamydomonas reinhardtii | |
| NADPH | - |
Zea mays | |
| NADPH | - |
Nicotiana tabacum | |
| NADPH | - |
Daucus carota | |
| NADPH | - |
Physcomitrium patens | |
| NADPH | - |
Marchantia paleacea | |
| NADPH | - |
Pinus mugo | |
| NADPH | - |
Nostoc punctiforme | |
| NADPH | - |
Cyanidioschyzon merolae | |
| NADPH | - |
Lyngbya majuscula | |
Ki Value [mM]
| Ki Value [mM] | Ki Value maximum [mM] | Inhibitor | Comment | Organism | Structure |
|---|---|---|---|---|---|
| 0.00215 | - |
protochlorophyllide | pH and temperature not specified in the publication | Nicotiana tabacum | |
| 0.00322 | - |
protochlorophyllide | pH and temperature not specified in the publication | Zea mays | |
| 0.0073 | - |
protochlorophyllide | pH and temperature not specified in the publication | Pinus mugo | |
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