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Literature summary for 1.2.1.11 extracted from

  • Blanco, J.; Moore, R.A.; Faehnle, C.R.; Coe, D.M.; Viola, R.E.
    The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase (2004), Acta Crystallogr. Sect. D, 60, 1388-1395.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expression of wild-type and mutant enzymes Haemophilus influenzae

Crystallization (Commentary)

Crystallization (Comment) Organism
10 mg/ml purified recombinant wild-type and mutant enzymes free or in complex with the substrates, protein in 10 mM HEPES, pH 7.0, 1 mM EDTA, 1 mM DTT, by hanging drop vapour diffusion, 20°C, mixed with equal volume of precipitant solution containing 22-24% PEG 3350, and 0.2 M ammonium acetate, crystals are soaked for 1 h in a solution containing 2 mM aspartate-beta-semialdehyde or 100 mM phosphate, 26% PEG 3350, 0.2 M ammonium acetate, 0.1 M Tris-HCl, pH 8.5, and 20% glycerol, X-ray diffraction structure determination and analysis at about 2.0 A resolution Haemophilus influenzae

Protein Variants

Protein Variants Comment Organism
E243D site-directed mutagenesis, unaltered Km for the substrates but 8fold increased Km for cofactor NADP+, active site structural alterations Haemophilus influenzae
K246R site-directed mutagenesis, mutation of a putative phosphate binding residue, unaltered substrate Km, active site structural alterations Haemophilus influenzae
R103K site-directed mutagenesis, adversely affected interaction between enzyme and phosphate, active site structural alterations Haemophilus influenzae
R103L site-directed mutagenesis, altered interaction between enzyme and phosphate, active site structural alterations Haemophilus influenzae
R270K site-directed mutagenesis, active site mutant, unaltered substrate Km, active site structural alterations Haemophilus influenzae

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.03
-
L-aspartate-4-semialdehyde recombinant mutant R103L Haemophilus influenzae
0.1
-
L-aspartate-4-semialdehyde recombinant mutant R103K and mutant K246L Haemophilus influenzae
0.11
-
NADP+ recombinant mutant R103L Haemophilus influenzae
0.17
-
NADP+ recombinant mutant R270K Haemophilus influenzae
0.2
-
NADP+ recombinant wild-type enzyme Haemophilus influenzae
0.2
-
L-aspartate-4-semialdehyde recombinant wild-type enzyme and mutant E243D Haemophilus influenzae
0.4
-
L-aspartate-4-semialdehyde recombinant mutant R270K Haemophilus influenzae
0.6
-
NADP+ recombinant mutant K246L Haemophilus influenzae
0.7
-
NADP+ recombinant mutant R103K Haemophilus influenzae
1
-
phosphate recombinant mutant K246L Haemophilus influenzae
1.5
-
phosphate recombinant mutant E243D Haemophilus influenzae
1.6
-
phosphate recombinant wild-type enzyme Haemophilus influenzae
1.6
-
NADP+ recombinant mutant E243D Haemophilus influenzae
1.9
-
phosphate recombinant mutant R270K Haemophilus influenzae
36.6
-
phosphate recombinant mutant R103K Haemophilus influenzae
240
-
phosphate recombinant mutant R103L Haemophilus influenzae

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
L-aspartate-4-semialdehyde + phosphate + NADP+ Haemophilus influenzae reductive dephosphorylation in the aspartate biosynthetic pathway, aspartate-beta-semialdehydr is the key intermediate in biosynthesis of diaminopimelic acid L-4-aspartyl phosphate + NADPH
-
r

Organism

Organism UniProt Comment Textmining
Haemophilus influenzae
-
gene asd
-

Reaction

Reaction Comment Organism Reaction ID
L-aspartate 4-semialdehyde + phosphate + NADP+ = L-4-aspartyl phosphate + NADPH + H+ catalytic mechanism, role of substrate binding groups, residues Arg270, Glu243, Arg103, and Lys246 are involved Haemophilus influenzae

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
L-aspartate-4-semialdehyde + phosphate + NADP+ reductive dephosphorylation in the aspartate biosynthetic pathway, aspartate-beta-semialdehydr is the key intermediate in biosynthesis of diaminopimelic acid Haemophilus influenzae L-4-aspartyl phosphate + NADPH
-
r
L-aspartate-4-semialdehyde + phosphate + NADP+ formation of an acyl-enzyme intermediate Haemophilus influenzae L-4-aspartyl phosphate + NADPH
-
r

Synonyms

Synonyms Comment Organism
ASADH
-
Haemophilus influenzae
aspartate-beta-semialdehyde dehydrogenase
-
Haemophilus influenzae

Temperature Stability [°C]

Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
additional information
-
stability of recombinant wild-type and mutant enzymes, oveview Haemophilus influenzae

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.24
-
L-aspartate-4-semialdehyde recombinant mutant R103L Haemophilus influenzae
0.4
-
L-aspartate-4-semialdehyde recombinant mutant R270K Haemophilus influenzae
1.2
-
L-aspartate-4-semialdehyde recombinant mutant R103K Haemophilus influenzae
4
-
L-aspartate-4-semialdehyde recombinant mutant E243D Haemophilus influenzae
11
-
L-aspartate-4-semialdehyde recombinant mutant K246L Haemophilus influenzae
330
-
L-aspartate-4-semialdehyde recombinant wild-type enzyme Haemophilus influenzae

Cofactor

Cofactor Comment Organism Structure
NADP+
-
Haemophilus influenzae
NADPH
-
Haemophilus influenzae