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Literature summary for 1.13.11.87 extracted from
- Rubber oxygenases (2019), Appl. Microbiol. Biotechnol., 103, 125-142 .
Molecular Weight [Da]
| Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
|---|---|---|---|
| 70800 | - |
mature protein | Rhizobacter gummiphilus |
| 74000 | - |
preprotein | Rhizobacter gummiphilus |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| cis-1,4-polyisoprene + n O2 | Rhodococcus rhodochrous | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? |  |
| cis-1,4-polyisoprene + n O2 | Nocardia farcinica | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | Gordonia polyisoprenivorans | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | Streptomyces sp. K30 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | Nocardia farcinica NVL3 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | Rhodococcus rhodochrous RPK1 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | Gordonia polyisoprenivorans VH2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | ? | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Gordonia polyisoprenivorans | - |
- |
- |
| Gordonia polyisoprenivorans VH2 | - |
- |
- |
| Nocardia farcinica | - |
- |
- |
| Nocardia farcinica NVL3 | - |
- |
- |
| Rhizobacter gummiphilus | - |
- |
- |
| Rhizobacter gummiphilus NS21 | - |
- |
- |
| Rhodococcus rhodochrous | - |
- |
- |
| Rhodococcus rhodochrous RPK1 | - |
- |
- |
| Streptomyces sp. K30 | - |
- |
- |
Posttranslational Modification
| Posttranslational Modification | Comment | Organism |
|---|---|---|
| proteolytic modification | the preprotein has a MW of 74000 Da, the mature protein has MW of 70800 Da | Rhizobacter gummiphilus |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Rhodococcus rhodochrous | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Nocardia farcinica | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Gordonia polyisoprenivorans | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Streptomyces sp. K30 | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Nocardia farcinica NVL3 | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Rhodococcus rhodochrous RPK1 | ? | - |
? | |
| cis-1,4-polyisoprene + n O2 | the enzyme cleaves polyisoprene randomly to a mixture of oligoisoprenoids (C20 to around C65 oligoisoprenoids) with terminal keto and aldehyde group | Gordonia polyisoprenivorans VH2 | ? | - |
? | |
| additional information | the enzyme has no peroxidase activity | Rhodococcus rhodochrous | ? | - |
- |
|
| additional information | the enzyme has no peroxidase activity | Nocardia farcinica | ? | - |
- |
|
| additional information | the enzyme has no peroxidase activity | Gordonia polyisoprenivorans | ? | - |
- |
|
| additional information | the enzyme has no peroxidase activity | Streptomyces sp. K30 | ? | - |
- |
|
| additional information | the enzyme has no peroxidase activity | Nocardia farcinica NVL3 | ? | - |
- |
|
| additional information | the enzyme has no peroxidase activity | Rhodococcus rhodochrous RPK1 | ? | - |
- |
|
| additional information | the enzyme has no peroxidase activity | Gordonia polyisoprenivorans VH2 | ? | - |
- |
|
| poly(cis-1,4-isoprene) + O2 | - |
Rhizobacter gummiphilus | ? | - |
? | |
| poly(cis-1,4-isoprene) + O2 | - |
Rhizobacter gummiphilus NS21 | ? | - |
? | |
| rubber + O2 | RoxB cleaves rubber in an endotype reaction | Rhizobacter gummiphilus | ? | - |
? | |
| rubber + O2 | RoxB cleaves rubber in an endotype reaction | Rhizobacter gummiphilus NS21 | ? | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| latex clearing protein | - |
Rhodococcus rhodochrous |
| latex clearing protein | - |
Nocardia farcinica |
| latex clearing protein | - |
Gordonia polyisoprenivorans |
| latex clearing protein | - |
Streptomyces sp. K30 |
| Lcp | - |
Rhodococcus rhodochrous |
| Lcp | - |
Nocardia farcinica |
| Lcp | - |
Gordonia polyisoprenivorans |
| Lcp | - |
Streptomyces sp. K30 |
| RoxB | - |
Rhizobacter gummiphilus |
| rubber oxygenase B | - |
Rhizobacter gummiphilus |
Cofactor
| Cofactor | Comment | Organism | Structure |
|---|---|---|---|
| heme | heme-containing enzyme | Rhizobacter gummiphilus | |
| heme | b-type monoheme protein | Rhodococcus rhodochrous | |
| heme | b-type monoheme protein | Nocardia farcinica | |
| heme | b-type monoheme protein | Gordonia polyisoprenivorans | |
| heme | b-type monoheme protein | Streptomyces sp. K30 | |
General Information
| General Information | Comment | Organism |
|---|---|---|
| metabolism | the synergistic action of the two rubber oxygenases RoxANS21 and RoxBNS21 enables the species to grow on polyisoprene latex as the sole source of carbon and energy | Rhizobacter gummiphilus |
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Release 2023.1 (January 2023)
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