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Literature summary for 1.13.11.41 extracted from

  • Guo, J.; Erskine, P.; Coker, A.; Gor, J.; Perkins, S.; Wood, S.; Cooper, J.
    Extension of resolution and oligomerization-state studies of 2,4'-dihydroxyacetophenone dioxygenase from Alcaligenes sp. 4HAP (2015), Acta Crystallogr. Sect. F, 71, 1258-1263 .
    View publication on PubMedView publication on EuropePMC

Crystallization (Commentary)

Crystallization (Comment) Organism
hanging drop vapour diffusion method, mixing of 5 mg/ml protein in 50 mM Tris, pH 7.3, 100 mM NaCl, and mM 4-hydroxybenzoic acid or 0.1 mM 4-aminobenzamidine, with reservoir solution containing 0.1 M sodium cacodylate pH 5.9-6.8 and 1.1-1.6 M sodium acetate, method optimization, X-ray diffraction structure determination and analysis at 1.88 A resolution. The use of limited chymotrypsinolysis, which apparently results in removal of the first 20 or so N-terminal residues of DAD, is necessary for crystallization of the protein Alcaligenes sp.

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
40000
-
recombinant chymotrypsinolysed enzyme, gel filtration and analytical ultracentrifugation Alcaligenes sp.
80000
-
recombinant wild-type enzyme, gel filtration and analytical ultracentrifugation Alcaligenes sp.

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
2,4'-dihydroxyacetophenone + O2 Alcaligenes sp.
-
4-hydroxybenzoate + formate
-
?
additional information Alcaligenes sp. enzyme DAD is very unusual in that it is involved in C-C bond cleavage in a substituent of the aromatic ring instead of cleaving within the aromatic ring of the substrate ?
-
?

Organism

Organism UniProt Comment Textmining
Alcaligenes sp. Q9REI7
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2,4'-dihydroxyacetophenone + O2
-
Alcaligenes sp. 4-hydroxybenzoate + formate
-
?
additional information enzyme DAD is very unusual in that it is involved in C-C bond cleavage in a substituent of the aromatic ring instead of cleaving within the aromatic ring of the substrate Alcaligenes sp. ?
-
?

Subunits

Subunits Comment Organism
dimer 2 * 20300, recombinant chymotrypsinolysed DAD, SDS-PAGE Alcaligenes sp.
tetramer 4 * 20300, recombinant wild-type enzyme, SDS-PAGE Alcaligenes sp.

Synonyms

Synonyms Comment Organism
DAD
-
Alcaligenes sp.