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Literature summary for 1.13.11.39 extracted from

  • Kim, S.J.; Shin, H.J.; Park, Y.C.; Kim, Y.; Min, K.H.; Kim, Y.C.
    The 2,3-dihydroxybiphenyl 1,2-dioxygenase gene (phnQ) of Pseudomonas sp. DJ77: nucleotide sequence, enzyme assay, and comparison with isofunctional dioxygenases (1999), J. Biochem. Mol. Biol., 32, 399-404.
No PubMed abstract available
Search for more literature for 1.13.11.39

Cloned(Commentary)

Cloned (Comment) Organism
gene bphC for meta-cleavage dioxygenase cloned and sequenced from genomic DNA and expressed in Escherichia coli Sphingobium yanoikuyae
strain DJ77, gene phnQ Pseudomonas sp.

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
biphenyl-2,3-diol + O2 Pseudomonas sp.
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2 Burkholderia cepacia
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2 Sphingobium yanoikuyae
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2 Rhodococcus globerulus
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2 Rhodococcus globerulus P6
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2 Pseudomonas sp. DJ77
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2 Sphingobium yanoikuyae Q1
-
 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?

Organism

Organism UniProt Comment Textmining
Burkholderia cepacia
-
 organism reclassified, prior refered as Pseudomonas sp. strain LB400 or Pseudomonas cepacia strain LB400
-
Pseudomonas sp.
-
-
-
Pseudomonas sp. DJ77
-
-
-
Rhodococcus globerulus
-
-
-
Rhodococcus globerulus P6
-
-
-
Sphingobium yanoikuyae
-
-
-
Sphingobium yanoikuyae Q1
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
3-methylcatechol + O2
-
 Burkholderia cepacia 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
3-methylcatechol + O2
-
 Sphingobium yanoikuyae 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
3-methylcatechol + O2 strain DJ77 Pseudomonas sp. 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
3-methylcatechol + O2 strain DJ77 Pseudomonas sp. DJ77 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
3-methylcatechol + O2
-
 Sphingobium yanoikuyae Q1 2-hydroxy-6-oxohepta-2,4-dienoate
-
 ?
4-chlorocatechol + O2
-
 Sphingobium yanoikuyae 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
4-chlorocatechol + O2 strain DJ77 Pseudomonas sp. 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
4-chlorocatechol + O2 strain DJ77 Pseudomonas sp. DJ77 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
4-chlorocatechol + O2
-
 Sphingobium yanoikuyae Q1 4-chloro-2-hydroxy-6-oxohexa-2,4-dienoate
-
 ?
4-methylcatechol + O2
-
 Sphingobium yanoikuyae 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
4-methylcatechol + O2 strain DJ77 Pseudomonas sp. 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
4-methylcatechol + O2 strain DJ77 Pseudomonas sp. DJ77 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
4-methylcatechol + O2
-
 Sphingobium yanoikuyae Q1 2-hydroxy-4-methyl-6-oxohexa-2,4-dienoate
-
 ?
biphenyl-2,3-diol + O2
-
 Pseudomonas sp. 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2
-
 Burkholderia cepacia 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2
-
 Sphingobium yanoikuyae 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2
-
 Rhodococcus globerulus 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2
-
 Rhodococcus globerulus P6 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2
-
 Pseudomonas sp. DJ77 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
biphenyl-2,3-diol + O2
-
 Sphingobium yanoikuyae Q1 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O
-
 ?
catechol + O2
-
 Pseudomonas sp. ?
-
 ?
catechol + O2
-
 Burkholderia cepacia ?
-
 ?
catechol + O2
-
 Sphingobium yanoikuyae ?
-
 ?
catechol + O2
-
 Pseudomonas sp. DJ77 ?
-
 ?
catechol + O2
-
 Sphingobium yanoikuyae Q1 ?
-
 ?