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Literature summary for 1.13.11.27 extracted from

  • Rocaboy-Faquet, E.; Noguer, T.; Romdhane, S.; Bertrand, C.; Dayan, F.E.; Barthelmebs, L.
    Novel bacterial bioassay for a high-throughput screening of 4-hydroxyphenylpyruvate dioxygenase inhibitors (2014), Appl. Microbiol. Biotechnol., 98, 7243-7252 .
    View publication on PubMed

Application

Application Comment Organism
agriculture plant 4-hydroxyphenylpyruvate dioxygenase (HPPD) is the molecular target of a range of commercial synthetic beta-triketone herbicides Their mode of action is based on an irreversible inhibition of HPPD Arabidopsis thaliana
drug development plant 4-hydroxyphenylpyruvate dioxygenase (HPPD) is the molecular target for development of specific inhibitors Arabidopsis thaliana

Cloned(Commentary)

Cloned (Comment) Organism
gene HPD, recombinant expression of N-terminally His6-tagged enzyme in Escherichia coli strain BL21(DE3), subcloning in Escherichia coli strain DH5alpha, determination of protein expression patterns Arabidopsis thaliana

Inhibitors

Inhibitors Comment Organism Structure
leptospermone
-
Arabidopsis thaliana
mesotrione
-
Arabidopsis thaliana
additional information high-throughput screening of 4-hydroxyphenylpyruvate dioxygenase inhibitors Arabidopsis thaliana
sulcotrione
-
Arabidopsis thaliana
tembotrione
-
Arabidopsis thaliana

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
4-hydroxyphenylpyruvate + O2 Arabidopsis thaliana
-
homogentisate + CO2
-
?

Organism

Organism UniProt Comment Textmining
Arabidopsis thaliana P93836
-
-

Purification (Commentary)

Purification (Comment) Organism
recombinant His6-tagged enzyme from Escherichia coli strain BL21(DE3) by nickel affinity chromatography Arabidopsis thaliana

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
4-hydroxyphenylpyruvate + O2
-
Arabidopsis thaliana homogentisate + CO2
-
?

Subunits

Subunits Comment Organism
? x * 48000, recombinant His-tagged enzyme, SDS-PAGE Arabidopsis thaliana

Synonyms

Synonyms Comment Organism
HPD
-
Arabidopsis thaliana
HPPD
-
Arabidopsis thaliana

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
37
-
assay at Arabidopsis thaliana

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.6
-
assay at Arabidopsis thaliana