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Literature summary for 1.12.99.6 extracted from

  • Tye, J.W.; Darensbourg, M.Y.; Hall, M.B.
    Refining the active site structure of iron-iron hydrogenase using computational infrared spectroscopy (2008), Inorg. Chem., 47, 2380-2388.
    View publication on PubMed

Inhibitors

Inhibitors Comment Organism Structure
CO binds terminally to the distal iron center Desulfovibrio vulgaris
CO binds terminally to the distal iron center Desulfovibrio vulgaris str. Hildenborough

Metals/Ions

Metals/Ions Comment Organism Structure
Fe the Hred form is assigned as a mixture of an Fe(I)Fe(I) form with an open site on the distal iron center and either a Fe(I)Fe(I) form in which the distal cyanide is protonated or a Fe(II)Fe(II) form with a bridging hydride ligand. The Hox form is assigned as a valence-localized Fe(I)Fe(II) redox level with an open site at the distal iron. The Hox air form is assigned as an Fe(II)Fe(II) redox level with OH- or OOH- bound to the distal iron center that may or may not have an oxygen atom bound to one of the sulfur atoms of the dithiolate linker Desulfovibrio vulgaris
Fe the Hred form is assigned as a mixture of an Fe(I)Fe(I) form with an open site on the distal iron center and either a Fe(I)Fe(I) form in which the distal cyanide is protonated or a Fe(II)Fe(II) form with a bridging hydride ligand. The Hox form is assigned as a valence-localized Fe(I)Fe(II) redox level with an open site at the distal iron. The Hox air form is assigned as an Fe(II)Fe(II) redox level with OH- or OOH- bound to the distal iron center that may or may not have an oxygen atom bound to one of the sulfur atoms of the dithiolate linker Desulfovibrio vulgaris str. Hildenborough

Organism

Organism UniProt Comment Textmining
Desulfovibrio vulgaris
-
-
-
Desulfovibrio vulgaris str. Hildenborough
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
H2 + oxidized electron acceptor
-
Desulfovibrio vulgaris H+ + reduced electron acceptor
-
?
H2 + oxidized electron acceptor
-
Desulfovibrio vulgaris str. Hildenborough H+ + reduced electron acceptor
-
?

Synonyms

Synonyms Comment Organism
[FeFe]H2ase
-
Desulfovibrio vulgaris
[FeFe]H2ase
-
Desulfovibrio vulgaris str. Hildenborough