BRENDA - Enzyme Database
show all sequences of 1.1.99.29

Properties of pyranose dehydrogenase purified from the litter-degrading fungus Agaricus xanthoderma

Kujawa, M.; Volc, J.; Halada, P.; Sedmera, P.; Divne, C.; Sygmund, C.; Leitner, C.; Peterbauer, C.; Haltrich, D.; FEBS J. 274, 879-894 (2007)

Data extracted from this reference:

Application
Application
Commentary
Organism
degradation
lignocellulose degradation
Agaricus xanthodermus
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.0017
-
3-ethylbenzthiazolin-6-sulfonic acid cation radical
at 30°C with 25 mM glucose as substrate
Agaricus xanthodermus
0.02
-
3,5-di-t-butyl-1,2-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.05
-
2,6-dichloroindophenol
at 30°C with 25 mM glucose as substrate
Agaricus xanthodermus
0.12
-
2-methylcyclohexa-2,5-diene-1,4-dione
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.12
-
ferricenium hexafluorophosphate
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.18
-
2-(hydroxymethyl)-6-methoxy-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.28
-
tetrachloro-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.33
-
ferricyanide
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.39
-
tetrafluoro-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.42
-
dimethylaminomethyl-ferricenium
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.78
-
D-glucose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
0.95
-
CuSO4
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
1.1
-
1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
1.6
-
2-chloro-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
11
-
D-galactose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
12
-
D-maltose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
17
-
D-arabinose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
17
-
gentiobiose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
25
-
D-xylose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
100
-
D-maltotriose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
120
-
beta-lactose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
Localization
Localization
Commentary
Organism
GeneOntology No.
Textmining
extracellular
-
Agaricus xanthodermus
-
-
Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
65400
-
SDS-PAGE, gel filtration, MALDI MS
Agaricus xanthodermus
Organism
Organism
UniProt
Commentary
Textmining
Agaricus xanthodermus
Q3L1D2
-
-
Posttranslational Modification
Posttranslational Modification
Commentary
Organism
glycoprotein
carbohydrate content of 5%
Agaricus xanthodermus
Purification (Commentary)
Purification (Commentary)
Organism
using ammonium sulfate fractionation and ion-exchange and hydrophobic interaction chromatography
Agaricus xanthodermus
Storage Stability
Storage Stability
Organism
several month at 4°, pH 6.5 in potassium phosphate buffer
Agaricus xanthodermus
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
Substrate Product ID
aldopyranose + 3,5-di-tert-butyl-1,2-benzoquinone
-
686685
Agaricus xanthodermus
2-aldoketose + reduced 3,5-di-tert-butyl-1,2-benzoquinone
-
-
-
-
beta-lactose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-arabinose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-galactose + benzoquinone
-
686685
Agaricus xanthodermus
2,3-didehydro-D-galactose + hydroquinone
two main reaction products
-
-
?
D-galactose + benzoquinone
-
686685
Agaricus xanthodermus
2-dehydro-D-galactose + hydroquinone
two main reaction products
-
-
?
D-glucose + 2,6-dichloroindophenol
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 2-(hydroxymethyl)-6-methoxy-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 2-chloro-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 3,5-di-t-butyl-1,2-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 3-ethylbenzthiazolin-6-sulfonic acid cation radical
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + benzoquinone
3-oxo-D-glucose, 1-alpha-3-dehydro-d-glucopyranose, 1-beta-3-dehydro-d-glucopyranose, 1-alpha-3-dehydro-d-glucopyranose hydrate, 1-beta-3-dehydro-d-glucopyranose hydrate, 2-dehydro-d-glucose, 1-alpha-2,3-bis-dehydro-d-glucopyranose bis-hydrate as minor reaction products
686685
Agaricus xanthodermus
2,3-didehydro-D-glucose + hydroquinone
-
-
-
?
D-glucose + CuSO4
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + dimethylaminomethyl-ferricenium
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + Fe3+
-
686685
Agaricus xanthodermus
3-dehydro-D-glucose + Fe2+ + H+
-
-
-
?
D-glucose + ferricyanide
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + methyl-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + tetrachloro-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + tetrafluoro-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-maltose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-maltotriose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-xylose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
gentiobiose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
Subunits
Subunits
Commentary
Organism
monomer
gel filtration
Agaricus xanthodermus
Synonyms
Synonyms
Commentary
Organism
PDH
-
Agaricus xanthodermus
pyranose dehydrogenase
-
Agaricus xanthodermus
pyranose:acceptor oxidoreductase
-
Agaricus xanthodermus
Temperature Optimum [°C]
Temperature Optimum [°C]
Temperature Optimum Maximum [°C]
Commentary
Organism
75
-
-
Agaricus xanthodermus
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
2.5
-
for glucose and 1,4-benzoquinone as substrates
Agaricus xanthodermus
8
-
for glucose and 1,4-benzoquinone as substrates
Agaricus xanthodermus
8.5
-
for glucose and ferricenium hexafluorophosphate as substrates
Agaricus xanthodermus
pH Range
pH Minimum
pH Maximum
Commentary
Organism
2
10
depending on the electron acceptor and with D-glucose as the electron donor, has 2 pH optima for some substrates
Agaricus xanthodermus
pH Stability
pH Stability
pH Stability Maximum
Commentary
Organism
4.7
7.7
in potassium phosphate buffer, half life of 126 days at pH 7.7
Agaricus xanthodermus
Cofactor
Cofactor
Commentary
Organism
Structure
FAD
covalent type of flavin-polypeptide linkage, no release by treatment with 5% trichloric acid and heating
Agaricus xanthodermus
pI Value
Organism
Commentary
pI Value Maximum
pI Value
Agaricus xanthodermus
isoelectric focusing, five isoforms
-
4.2
Application (protein specific)
Application
Commentary
Organism
degradation
lignocellulose degradation
Agaricus xanthodermus
Cofactor (protein specific)
Cofactor
Commentary
Organism
Structure
FAD
covalent type of flavin-polypeptide linkage, no release by treatment with 5% trichloric acid and heating
Agaricus xanthodermus
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.0017
-
3-ethylbenzthiazolin-6-sulfonic acid cation radical
at 30°C with 25 mM glucose as substrate
Agaricus xanthodermus
0.02
-
3,5-di-t-butyl-1,2-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.05
-
2,6-dichloroindophenol
at 30°C with 25 mM glucose as substrate
Agaricus xanthodermus
0.12
-
2-methylcyclohexa-2,5-diene-1,4-dione
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.12
-
ferricenium hexafluorophosphate
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.18
-
2-(hydroxymethyl)-6-methoxy-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.28
-
tetrachloro-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.33
-
ferricyanide
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.39
-
tetrafluoro-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.42
-
dimethylaminomethyl-ferricenium
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
0.78
-
D-glucose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
0.95
-
CuSO4
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
1.1
-
1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
1.6
-
2-chloro-1,4-benzoquinone
at 30°C with 25 mM glucose as susbtrate
Agaricus xanthodermus
11
-
D-galactose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
12
-
D-maltose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
17
-
D-arabinose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
17
-
gentiobiose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
25
-
D-xylose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
100
-
D-maltotriose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
120
-
beta-lactose
at 30°C with 0.4 mM ferricenium as electron acceptor
Agaricus xanthodermus
Localization (protein specific)
Localization
Commentary
Organism
GeneOntology No.
Textmining
extracellular
-
Agaricus xanthodermus
-
-
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
65400
-
SDS-PAGE, gel filtration, MALDI MS
Agaricus xanthodermus
Posttranslational Modification (protein specific)
Posttranslational Modification
Commentary
Organism
glycoprotein
carbohydrate content of 5%
Agaricus xanthodermus
Purification (Commentary) (protein specific)
Commentary
Organism
using ammonium sulfate fractionation and ion-exchange and hydrophobic interaction chromatography
Agaricus xanthodermus
Storage Stability (protein specific)
Storage Stability
Organism
several month at 4°, pH 6.5 in potassium phosphate buffer
Agaricus xanthodermus
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
ID
aldopyranose + 3,5-di-tert-butyl-1,2-benzoquinone
-
686685
Agaricus xanthodermus
2-aldoketose + reduced 3,5-di-tert-butyl-1,2-benzoquinone
-
-
-
-
beta-lactose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-arabinose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-galactose + benzoquinone
-
686685
Agaricus xanthodermus
2,3-didehydro-D-galactose + hydroquinone
two main reaction products
-
-
?
D-galactose + benzoquinone
-
686685
Agaricus xanthodermus
2-dehydro-D-galactose + hydroquinone
two main reaction products
-
-
?
D-glucose + 2,6-dichloroindophenol
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 2-(hydroxymethyl)-6-methoxy-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 2-chloro-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 3,5-di-t-butyl-1,2-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + 3-ethylbenzthiazolin-6-sulfonic acid cation radical
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + benzoquinone
3-oxo-D-glucose, 1-alpha-3-dehydro-d-glucopyranose, 1-beta-3-dehydro-d-glucopyranose, 1-alpha-3-dehydro-d-glucopyranose hydrate, 1-beta-3-dehydro-d-glucopyranose hydrate, 2-dehydro-d-glucose, 1-alpha-2,3-bis-dehydro-d-glucopyranose bis-hydrate as minor reaction products
686685
Agaricus xanthodermus
2,3-didehydro-D-glucose + hydroquinone
-
-
-
?
D-glucose + CuSO4
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + dimethylaminomethyl-ferricenium
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + Fe3+
-
686685
Agaricus xanthodermus
3-dehydro-D-glucose + Fe2+ + H+
-
-
-
?
D-glucose + ferricyanide
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + methyl-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + tetrachloro-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-glucose + tetrafluoro-1,4-benzoquinone
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-maltose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-maltotriose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
D-xylose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
gentiobiose + ferricenium hexafluorophosphate
-
686685
Agaricus xanthodermus
?
-
-
-
?
Subunits (protein specific)
Subunits
Commentary
Organism
monomer
gel filtration
Agaricus xanthodermus
Temperature Optimum [°C] (protein specific)
Temperature Optimum [°C]
Temperature Optimum Maximum [°C]
Commentary
Organism
75
-
-
Agaricus xanthodermus
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
2.5
-
for glucose and 1,4-benzoquinone as substrates
Agaricus xanthodermus
8
-
for glucose and 1,4-benzoquinone as substrates
Agaricus xanthodermus
8.5
-
for glucose and ferricenium hexafluorophosphate as substrates
Agaricus xanthodermus
pH Range (protein specific)
pH Minimum
pH Maximum
Commentary
Organism
2
10
depending on the electron acceptor and with D-glucose as the electron donor, has 2 pH optima for some substrates
Agaricus xanthodermus
pH Stability (protein specific)
pH Stability
pH Stability Maximum
Commentary
Organism
4.7
7.7
in potassium phosphate buffer, half life of 126 days at pH 7.7
Agaricus xanthodermus
pI Value (protein specific)
Organism
Commentary
pI Value Maximum
pI Value
Agaricus xanthodermus
isoelectric focusing, five isoforms
-
4.2
Other publictions for EC 1.1.99.29
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Synonyms
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
739926
Graf
Characterization of three pyra ...
Leucoagaricus meleagris
Appl. Microbiol. Biotechnol.
101
2879-2891
2017
-
-
1
-
-
-
-
36
-
-
1
-
-
8
-
1
1
-
-
-
-
-
36
1
3
2
-
1
36
1
-
-
1
-
-
-
-
-
3
3
-
-
-
-
-
-
37
-
-
3
-
-
-
3
3
-
-
-
-
36
3
3
-
3
36
3
-
-
-
-
-
-
-
36
36
740401
Gonaus
Analysis of Agaricus meleagris ...
Leucoagaricus meleagris
Enzyme Microb. Technol.
99
57-66
2017
-
-
1
-
6
-
-
40
-
-
1
-
-
2
-
1
1
-
-
-
-
-
4
1
2
-
-
-
40
-
-
-
1
-
-
-
-
-
1
1
-
6
-
-
-
-
40
-
-
1
-
-
-
1
1
-
-
-
-
4
1
-
-
-
40
-
-
-
-
-
-
-
-
-
-
741362
Gonaus
Transcription analysis of pyra ...
Agaricus bisporus, Agaricus bisporus DSM 3056
Protein Expr. Purif.
119
36-44
2016
-
-
1
-
-
-
-
13
-
-
-
-
-
6
-
-
1
-
-
1
-
1
17
1
1
1
-
-
13
1
1
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
13
-
-
-
-
-
-
-
1
-
1
-
1
17
1
1
-
-
13
1
1
1
-
-
-
-
-
13
13
740437
Graf
Reaction of pyranose dehydroge ...
Leucoagaricus meleagris
FEBS J.
282
4218-4241
2015
-
-
1
-
8
-
-
-
-
-
1
-
-
1
-
1
1
-
-
-
-
-
1
1
1
-
-
-
-
-
-
-
1
-
-
-
-
-
1
1
-
8
-
-
-
-
-
-
-
1
-
-
-
1
1
-
-
-
-
1
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
741112
Yakovleva
Engineering of pyranose dehydr ...
Leucoagaricus meleagris
Phys. Chem. Chem. Phys.
17
9074-9081
2015
-
-
1
-
-
-
-
-
1
-
-
-
-
3
-
1
1
-
-
-
-
-
1
-
1
-
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21
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1
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1
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