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Literature summary for 1.1.2.10 extracted from

  • Wang, L.; Suganuma, S.; Hibino, A.; Mitsui, R.; Tani, A.; Matsumoto, T.; Ebihara, A.; Fitriyanto, N.A.; Pertiwiningrum, A.; Shimada, M.; Hayakawa, T.; Nakagawa, T.
    Lanthanide-dependent methanol dehydrogenase from the legume symbiotic nitrogen-fixing bacterium Bradyrhizobium diazoefficiens strain USDA110 (2019), Enzyme Microb. Technol., 130, 109371 .
    View publication on PubMed

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.067
-
methanol at pH 9.0 and 30°C Bradyrhizobium diazoefficiens

Metals/Ions

Metals/Ions Comment Organism Structure
Ce3+ highest activity with 0.03 mM Ce3+. The enzyme contains 0.58 cerium atoms per subunit Bradyrhizobium diazoefficiens
La3+ second highest activity with 0.03 mM La3+ Bradyrhizobium diazoefficiens
Nd3+ activates at 0.03 mM Bradyrhizobium diazoefficiens
Pr3+ activates at 0.03 mM Bradyrhizobium diazoefficiens

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
136000
-
calculated from SAXS data Bradyrhizobium diazoefficiens

Organism

Organism UniProt Comment Textmining
Bradyrhizobium diazoefficiens
-
-
-
Bradyrhizobium diazoefficiens USDA110
-
-
-

Purification (Commentary)

Purification (Comment) Organism
ammonium sulfate precipitation, Toyopearl butyl-650S column chromatography and HiTrap column chromatography Bradyrhizobium diazoefficiens

Source Tissue

Source Tissue Comment Organism Textmining
culture condition:methanol-grown cell
-
Bradyrhizobium diazoefficiens
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1-butanol + phenazine ethosulfate 78.3% activity compared to methanol Bradyrhizobium diazoefficiens butyraldehyde + reduced phenazine ethosulfate
-
r
1-butanol + phenazine ethosulfate 78.3% activity compared to methanol Bradyrhizobium diazoefficiens USDA110 butyraldehyde + reduced phenazine ethosulfate
-
r
1-propanol + phenazine ethosulfate 85.3% activity compared to methanol Bradyrhizobium diazoefficiens propionaldehyde + reduced phenazine ethosulfate
-
r
1-propanol + phenazine ethosulfate 85.3% activity compared to methanol Bradyrhizobium diazoefficiens USDA110 propionaldehyde + reduced phenazine ethosulfate
-
r
2-propanol + phenazine ethosulfate 0.775% activity compared to methanol Bradyrhizobium diazoefficiens ?
-
r
2-propanol + phenazine ethosulfate 0.775% activity compared to methanol Bradyrhizobium diazoefficiens USDA110 ?
-
r
ethanol + phenazine ethosulfate 93% activity compared to methanol Bradyrhizobium diazoefficiens acetaldehyde + reduced phenazine ethosulfate
-
r
ethanol + phenazine ethosulfate 93% activity compared to methanol Bradyrhizobium diazoefficiens USDA110 acetaldehyde + reduced phenazine ethosulfate
-
r
formaldehyde + reduced phenazine ethosulfate 91.5% activity compared to methanol Bradyrhizobium diazoefficiens methanol + phenazine ethosulfate
-
r
methanol + phenazine ethosulfate 100% activity Bradyrhizobium diazoefficiens formaldehyde + reduced phenazine ethosulfate
-
r
methanol + phenazine ethosulfate 100% activity Bradyrhizobium diazoefficiens USDA110 formaldehyde + reduced phenazine ethosulfate
-
r

Subunits

Subunits Comment Organism
homodimer 2 * 64000, SDS-PAGE Bradyrhizobium diazoefficiens

Synonyms

Synonyms Comment Organism
lanthanides-dependent MDH
-
Bradyrhizobium diazoefficiens
XoxF
-
Bradyrhizobium diazoefficiens
XoxF5-type MDH
-
Bradyrhizobium diazoefficiens

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
35
-
-
Bradyrhizobium diazoefficiens

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
9
-
-
Bradyrhizobium diazoefficiens