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Literature summary for 1.1.1.28 extracted from

  • Jia, B.; Pu, Z.J.; Tang, K.; Jia, X.; Kim, K.H.; Liu, X.; Jeon, C.O.
    Catalytic, computational, and evolutionary analysis of the (R)-lactate dehydrogenases responsible for D-lactic acid production in lactic acid bacteria (2018), J. Agric. Food Chem., 66, 8371-8381 .
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expression in Escherichia coli Leuconostoc mesenteroides subsp. mesenteroides

Crystallization (Commentary)

Crystallization (Comment) Organism
molecular modeling and docking of substrates. D-LDH1 binds pyruvate using Tyr101, Arg235, and His296 by hydrogen bonds in the NADH-pyruvate-LDH1 complex Leuconostoc mesenteroides subsp. mesenteroides

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.12
-
NAD+ pH 9, 30°C Leuconostoc mesenteroides subsp. mesenteroides
0.32
-
NADH pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
2.66
-
pyruvate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
78.8
-
oxaloacetate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
87.9
-
(R)-lactate pH 8, , 30°C Leuconostoc mesenteroides subsp. mesenteroides
234
-
2-oxobutanoate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides

Organism

Organism UniProt Comment Textmining
Leuconostoc mesenteroides subsp. mesenteroides
-
-
-
Leuconostoc mesenteroides subsp. mesenteroides J18
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
(R)-lactate + NAD+
-
Leuconostoc mesenteroides subsp. mesenteroides pyruvate + NADH + H+
-
r
(R)-lactate + NAD+
-
Leuconostoc mesenteroides subsp. mesenteroides J18 pyruvate + NADH + H+
-
r
2-oxobutanoate + NADH + H+
-
Leuconostoc mesenteroides subsp. mesenteroides 2-hydroxybutanoate + NAD+
-
?
2-oxobutanoate + NADH + H+
-
Leuconostoc mesenteroides subsp. mesenteroides J18 2-hydroxybutanoate + NAD+
-
?
additional information no substrate: phenylpyruvate Leuconostoc mesenteroides subsp. mesenteroides ?
-
-
additional information no substrate: phenylpyruvate Leuconostoc mesenteroides subsp. mesenteroides J18 ?
-
-
oxaloacetate + NADH + H+
-
Leuconostoc mesenteroides subsp. mesenteroides D-malate + NAD+
-
?
oxaloacetate + NADH + H+
-
Leuconostoc mesenteroides subsp. mesenteroides J18 D-malate + NAD+
-
?
pyruvate + NADH + H+
-
Leuconostoc mesenteroides subsp. mesenteroides (R)-lactate + NAD+
-
r
pyruvate + NADH + H+
-
Leuconostoc mesenteroides subsp. mesenteroides J18 (R)-lactate + NAD+
-
r

Synonyms

Synonyms Comment Organism
D-LDH1
-
Leuconostoc mesenteroides subsp. mesenteroides

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
340
-
NAD+ pH 9, 30°C Leuconostoc mesenteroides subsp. mesenteroides
910
-
(R)-lactate pH 8, , 30°C Leuconostoc mesenteroides subsp. mesenteroides
1570
-
oxaloacetate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
2220
-
2-oxobutanoate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
2750
-
pyruvate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
3260
-
NADH pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
9
-
optimum of pyruvate reduction Leuconostoc mesenteroides subsp. mesenteroides
10
-
optimum of lactate oxidation Leuconostoc mesenteroides subsp. mesenteroides

General Information

General Information Comment Organism
physiological function isoform D-LDH1 is the major enzyme responsible for D-lactic acid production in Leuconostoc mesenteroides J18 Leuconostoc mesenteroides subsp. mesenteroides

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
9.48
-
2-oxobutanoate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
10.32
-
(R)-lactate pH 8, , 30°C Leuconostoc mesenteroides subsp. mesenteroides
19.87
-
oxaloacetate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
1030
-
pyruvate pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides
2820
-
NAD+ pH 9, 30°C Leuconostoc mesenteroides subsp. mesenteroides
10200
-
NADH pH 8, 30°C Leuconostoc mesenteroides subsp. mesenteroides