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Reference on EC 5.1.3.13 - dTDP-4-dehydrorhamnose 3,5-epimerase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Wahl, H.P.; Grisebach, H.
Biosynthesis of streptomycin. dTDP-dihydrostreptose synthase from Streptomyces griseus and dTDP-4-keto-L-rhamnose 3,5-epimerase from S. griseus and Escherichia coli Y10
Biochim. Biophys. Acta
568
243-252
1979
Escherichia coli, Escherichia coli Y10
Manually annotated by BRENDA team
Wahl, H.P.; Matern, U.; Grisebach, H.
Two enzymes in Streptomyces griseus for the synthesis of dTDP-L-dihydrostreptose from dTFP-6-deoxy-D-xylo-4-hexosulose
Biochem. Biophys. Res. Commun.
64
1041-1045
1975
Streptomyces griseus
Manually annotated by BRENDA team
Gaugler, R.W.; Gabriel, O.
Biological mechanisms involved in the formation of deoxy sugars. VII. Biosynthesis of 6-deoxy-L-talose
J. Biol. Chem.
248
6041-6049
1973
Escherichia coli, Pseudomonas aeruginosa, Escherichia coli 45
Manually annotated by BRENDA team
Otten, S.L.; Gallo, M.A.; Madduri, K.; Liu, X.; Hutchinson, C.R.
Cloning and characterization of the Streptomyces peucetius dnmZUV genes encoding three enzymes required for biosynthesis of the daunorubicin precursor thymidine diphospho-L-daunosamine
J. Bacteriol.
179
4446-4450
1997
Streptomyces peucetius
Manually annotated by BRENDA team
Mamuro, K.; Lindqvist, L.; Verma, N.; Weintraub, A.; Reeves, P.R.; Lindberg, A.A.
Enzymatic synthesis and isolation of thymidine diphosphate-6-deoxy-D-xylo-4-hexulose and thymidine diphosphate-L-rhamnose
Eur. J. Biochem.
204
539-545
1992
Escherichia coli
Manually annotated by BRENDA team
Graninger, M.; Nidetzky, B.; Heinrichs, D.E.; Whitfield, C.; Messner, P.
Characterization of dTDP-4-dehydrorhamnose 3,5-epimerase and dTDP-4-dehydrorhamnose reductase, required for dTDP-L-rhamnose biosynthesis in Salmonella enterica serovar typhimurium LT2
J. Biol. Chem.
274
25069-25077
1999
Salmonella enterica
Manually annotated by BRENDA team
Christendat, D.; Saridakis, V.; Dharamsi, A.; Bochkarev, A.; Pai, E.F.; Arrowsmith, C.H.; Edwards, A.M.
Crystal structure of dTDP-4-keto-6-deoxy-D-hexulose 3,5-epimerase from Methanobacterium thermoautotrophicum complexed with dTDP
J. Biol. Chem.
275
24608-24612
2000
Methanothermobacter thermautotrophicus
Manually annotated by BRENDA team
Giraud, M.F.; Leonard, G.A.; Field, R.A.; Berlind, C.; Naismith, J.H.
RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase
Nat. Struct. Biol.
7
398-402
2000
Salmonella enterica
Manually annotated by BRENDA team
Dong, C.; Major, L.L.; Allen, A.; Blankenfeldt, W.; Maskell, D.; Naismith, J.H.
High-resolution structures of RmlC from Streptococcus suis in complex with substrate analogs locate the active site of this class of Enzyme
Structure
11
715-723
2003
Streptococcus suis
Manually annotated by BRENDA team
Thuy, T.T.T.; Lee, H.C.; Kim, C.G.; Heide, L.; Sohng, J.K.
Functional characterizations of novWUS involved in novobiocin biosynthesis from Streptomyces spheroides
Arch. Biochem. Biophys.
436
161-167
2005
Streptomyces niveus
Manually annotated by BRENDA team
Elling, L.; Rupprath, C.; Gunther, N.; Romer, U.; Verseck, S.; Weingarten, P.; Drager, G.; Kirschning, A.; Piepersberg, W.
An enzyme module system for the synthesis of dTDP-activated deoxysugars from dTMP and sucrose
ChemBioChem
6
1423-1430
2005
Salmonella enterica
Manually annotated by BRENDA team
Dong, C.; Major, L.L.; Srikannathasan, V.; Errey, J.C.; Giraud, M.F.; Lam, J.S.; Graninger, M.; Messner, P.; McNeil, M.R.; Field, R.A.; Whitfield, C.; Naismith, J.H.
RmlC, a C3 and C5 carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation
J. Mol. Biol.
365
146-159
2007
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv, Pseudomonas aeruginosa, Salmonella enterica
Manually annotated by BRENDA team
Sivendran, S.; Jones, V.; Sun, D.; Wang, Y.; Grzegorzewicz, A.E.; Scherman, M.S.; Napper, A.D.; McCammon, J.A.; Lee, R.E.; Diamond, S.L.; McNeil, M.
Identification of triazinoindol-benzimidazolones as nanomolar inhibitors of the Mycobacterium tuberculosis enzyme TDP-6-deoxy-D-xylo-4-hexopyranosid-4-ulose 3,5-epimerase (RmlC)
Bioorg. Med. Chem.
18
896-908
2010
Mycobacterium tuberculosis (P9WH11), Mycobacterium tuberculosis
Manually annotated by BRENDA team
Nguyen, V.; Flanagan, B.; Mikkelsen, D.; Ramirez, S.; Rivas, L.; Gidley, M.; Dykes, G.
Spontaneous mutation results in lower cellulose production by a Gluconacetobacter xylinus strain from Kombucha
Carbohydr. Polym.
80
338-344
2010
Komagataeibacter xylinus
-
Manually annotated by BRENDA team
Tang, G.; Mintz, K.P.
Glycosylation of the collagen adhesin EmaA of Aggregatibacter actinomycetemcomitans is dependent upon the lipopolysaccharide biosynthetic pathway
J. Bacteriol.
192
1395-1404
2010
Aggregatibacter actinomycetemcomitans (O05369)
Manually annotated by BRENDA team
Parakkottil Chothi, M.; Duncan, G.; Armirotti, A.; Abergel, C.; Gurnon, J.; Van Etten, J.; Bernardi, C.; Damonte, G.; Tonetti, M.
Identification of an L-rhamnose synthetic pathway in two nucleocytoplasmic large DNA viruses
J. Virol.
84
8829-8838
2010
Acanthamoeba polyphaga Mimivirus (E3VXL5)
Manually annotated by BRENDA team
Singh, B.; Oh, T.; Sohng, J.
Exploration of two epimerase homologs in Streptomyces peucetius ATCC 27952
Appl. Microbiol. Biotechnol.
97
2493-2502
2013
Streptomyces peucetius (C5J048), Streptomyces peucetius (O33707), Streptomyces peucetius ATCC 27952 (C5J048), Streptomyces peucetius ATCC 27952 (O33707)
Manually annotated by BRENDA team
Shornikov, A.; Tran, H.; Macias, J.; Halavaty, A.S.; Minasov, G.; Anderson, W.F.; Kuhn, M.L.
Structure of the Bacillus anthracis dTDP-L-rhamnose-biosynthetic enzyme dTDP-4-dehydrorhamnose 3,5-epimerase (RfbC)
Acta Crystallogr. Sect. F
73
664-671
2017
Bacillus anthracis (Q81TP1), Bacillus anthracis, Bacillus anthracis Ames (Q81TP1)
Manually annotated by BRENDA team
Feng, L.; Shou, Q.; Butcher, R.A.
Identification of a dTDP-rhamnose biosynthetic pathway that oscillates with the molting cycle in Caenorhabditis elegans
Biochem. J.
473
1507-1521
2016
Caenorhabditis elegans (Q17993), Caenorhabditis elegans
Manually annotated by BRENDA team
Kaminski, L.; Eichler, J.
Haloferax volcanii N-glycosylation delineating the pathway of dTDP-rhamnose biosynthesis
PLoS ONE
9
e97441
2014
Haloferax volcanii (D4GU69), Haloferax volcanii, Haloferax volcanii WR536 / H53 / ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2 (D4GU69)
Manually annotated by BRENDA team