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Reference on EC 2.7.7.52 - RNA uridylyltransferase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Bakalara, N.; Simpson, A.M.; Simpson, L.
The Leishmania kinetoplast-mitochondrion contains terminal uridylyltransferase and RNA ligase activities
J. Biol. Chem.
264
18679-18686
1989
Leishmania tarentolae, Leishmania tarentolae UC
Manually annotated by BRENDA team
Zabel, P.; Dorssers, L.; Wernars, K.; van Kammen, A.
Terminal uridylyl transferase of Vigna unguiculata: purification and characterization of an enzyme catalyzing the addition of a single UMP residue to the 3-end of an RNA primer
Nucleic Acids Res.
9
2433-2453
1981
Vigna unguiculata
Manually annotated by BRENDA team
Andrews, N.C.; Baltimore, D.
Purification of a terminal uridylyltransferase that acts as host factor in the in vitro poliovirus replicase reaction
Proc. Natl. Acad. Sci. USA
83
221-225
1986
Homo sapiens
Manually annotated by BRENDA team
Sugisaki, H.
Purification of terminal uridylyltransferase from the Crithidia kinetoplast-mitochondrion
ICR Annual Report
7
58-59
2001
Crithidia fasciculata
-
Manually annotated by BRENDA team
Aphasizhev, R.; Sbicego, S.; Peris, M.; Jang, S.H.; Aphasizheva, I.; Simpson, A.M.; Rivlin, A.; Simpson, L.
Trypanosome mitochondrial 3' terminal uridylyl transferase (TUTase): the key enzyme in U-insertion/deletion RNA editing
Cell
108
637-648
2002
Leishmania tarentolae, Trypanosoma brucei
Manually annotated by BRENDA team
Ernst, N.L.; Panicucci, B.; Igo, R.P., Jr.; Panigrahi, A.K.; Salavati, R.; Stuart, K.
TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome
Mol. Cell
11
1525-1536
2003
Trypanosoma brucei
Manually annotated by BRENDA team
Trippe, R.; Richly, H.; Benecke, B.J.
Biochemical characterization of a U6 small nuclear RNA-specific terminal uridylyltransferase
Eur. J. Biochem.
270
971-980
2003
Homo sapiens
Manually annotated by BRENDA team
Aphasizhev, R.; Aphasizheva, I.; Simpson, L.
A tale of two TUTases
Proc. Natl. Acad. Sci. USA
100
10617-10622
2003
Trypanosoma brucei
Manually annotated by BRENDA team
Gott, J.M.
Two distinct roles for terminal uridylyl transferases in RNA editing
Proc. Natl. Acad. Sci. USA
100
10583-10584
2003
Trypanosoma brucei
Manually annotated by BRENDA team
Aphasizhev, R.; Aphasizheva, I.; Simpson, L.
Multiple terminal uridylyltransferases of trypanosomes
FEBS Lett.
572
15-18
2004
Trypanosoma brucei
Manually annotated by BRENDA team
Nebohacova, M.; Maslov, D.A.; Falick, A.M.; Simpson, L.
The effect of RNA interference down-regulation of RNA editing 3'-terminal uridylyl transferase (TUTase) 1 on mitochondrial de novo protein synthesis and stability of respiratory complexes in Trypanosoma brucei
J. Biol. Chem.
279
7819-7825
2004
Trypanosoma brucei
Manually annotated by BRENDA team
Stagno, J.; Aphasizheva, I.; Rosengarth, A.; Luecke, H.; Aphasizhev, R.
UTP-bound and Apo structures of a minimal RNA uridylyltransferase
J. Mol. Biol.
366
882-899
2007
Trypanosoma brucei (Q381M1)
Manually annotated by BRENDA team
Aphasizhev, R.; Aphasizheva, I.
RNA editing uridylyltransferases of trypanosomatids
Methods Enzymol.
424
55-73
2007
Leishmania tarentolae, Trypanosoma brucei
Manually annotated by BRENDA team
Zhelonkina, A.G.; OHearn, S.F.; Law, J.A.; Cruz-Reyes, J.; Huang, C.E.; Alatortsev, V.S.; Sollner-Webb, B.
T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle
RNA
12
476-487
2006
Trypanosoma brucei, Trypanosoma brucei TREU-667
Manually annotated by BRENDA team
Aphasizhev, R.; Aphasizheva, I.
Terminal RNA uridylyltransferases of trypanosomes
Biochim. Biophys. Acta
1779
270-280
2008
Leishmania tarentolae, Trypanosoma brucei
Manually annotated by BRENDA team
Heo, I.; Ha, M.; Lim, J.; Yoon, M.; Park, J.; Kwon, S.; Chang, H.; Kim, V.
Mono-uridylation of pre-microRNA as a key step in the biogenesis of group II let-7 microRNAs
Cell
151
521-532
2012
Homo sapiens (Q5TAX3), Homo sapiens (Q5VYS8)
Manually annotated by BRENDA team
Stagno, J.; Aphasizheva, I.; Bruystens, J.; Luecke, H.; Aphasizhev, R.
Structure of the mitochondrial editosome-like complex associated TUTase 1 reveals divergent mechanisms of UTP selection and domain organization
J. Mol. Biol.
399
464-475
2010
Trypanosoma brucei (C7AJA4), Trypanosoma brucei
Manually annotated by BRENDA team
Ringpis, G.E.; Aphasizheva, I.; Wang, X.; Huang, L.; Lathrop, R.H.; Hatfield, G.W.; Aphasizhev, R.
Mechanism of U insertion RNA editing in trypanosome mitochondria: the bimodal TUTase activity of the core complex
J. Mol. Biol.
399
680-695
2010
Trypanosoma brucei
Manually annotated by BRENDA team
Ringpis, G.E.; Stagno, J.; Aphasizhev, R.
Mechanism of U-insertion RNA editing in trypanosome mitochondria: characterization of RET2 functional domains by mutational analysis
J. Mol. Biol.
399
696-706
2010
Trypanosoma brucei
Manually annotated by BRENDA team
Aphasizheva, I.; Aphasizhev, R.
RET1-catalyzed uridylylation shapes the mitochondrial transcriptome in Trypanosoma brucei
Mol. Cell. Biol.
30
1555-1567
2010
Trypanosoma brucei
Manually annotated by BRENDA team
Talsky, K.B.; Collins, K.
Strand-asymmetric endogenous Tetrahymena small RNA production requires a previously uncharacterized uridylyltransferase protein partner
RNA
18
1553-1562
2012
Tetrahymena thermophila (I1Y9V9)
Manually annotated by BRENDA team
Thornton, J.E.; Chang, H.M.; Piskounova, E.; Gregory, R.I.
Lin28-mediated control of let-7 microRNA expression by alternative TUTases Zcchc11 (TUT4) and Zcchc6 (TUT7)
RNA
18
1875-1885
2012
Homo sapiens (Q5TAX3), Homo sapiens (Q5VYS8)
Manually annotated by BRENDA team
Reimao-Pinto, M.M.; Ignatova, V.; Burkard, T.R.; Hung, J.H.; Manzenreither, R.A.; Sowemimo, I.; Herzog, V.A.; Reichholf, B.; Farina-Lopez, S.; Ameres, S.L.
Uridylation of RNA hairpins by tailor confines the emergence of microRNAs in Drosophila
Mol. Cell
59
203-216
2015
Drosophila melanogaster (Q9VI58)
Manually annotated by BRENDA team
Sement, F.M.; Ferrier, E.; Zuber, H.; Merret, R.; Alioua, M.; Deragon, J.M.; Bousquet-Antonelli, C.; Lange, H.; Gagliardi, D.
Uridylation prevents 3 trimming of oligoadenylated mRNAs
Nucleic Acids Res.
41
7115-7127
2013
Arabidopsis thaliana (O64642), Arabidopsis thaliana Col-0 (O64642)
Manually annotated by BRENDA team
Tu, B.; Liu, L.; Xu, C.; Zhai, J.; Li, S.; Lopez, M.A.; Zhao, Y.; Yu, Y.; Ramachandran, V.; Ren, G.; Yu, B.; Li, S.; Meyers, B.C.; Mo, B.; Chen, X.
Distinct and cooperative activities of HESO1 and URT1 nucleotidyl transferases in microRNA turnover in Arabidopsis
PLoS Genet.
11
e1005119
2015
Arabidopsis thaliana (O64642), Arabidopsis thaliana (Q5XET5)
Manually annotated by BRENDA team
Chung, C.Z.; Jo, D.H.; Heinemann, I.U.
Nucleotide specificity of the human terminal nucleotidyltransferase Gld2 (TUT2)
RNA
22
1239-1249
2016
Homo sapiens
Manually annotated by BRENDA team
Zhu, L.; Hu, Q.; Cheng, L.; Jiang, Y.; Lv, M.; Liu, Y.; Li, F.; Shi, Y.; Gong, Q.
Crystal structure of Arabidopsis terminal uridylyl transferase URT1
Biochem. Biophys. Res. Commun.
524
490-496
2020
Arabidopsis thaliana (O64642)
Manually annotated by BRENDA team
Yashiro, Y.; Tomita, K.
Function and regulation of human terminal uridylyltransferases
Front. Genet.
9
538
2018
Homo sapiens (F5H0R1), Homo sapiens (Q5TAX3), Homo sapiens (Q5VYS8)
Manually annotated by BRENDA team
Modepalli, V.; Moran, Y.
Evolution of miRNA tailing by 3' terminal uridylyl transferases in Metazoa
Genome Biol. Evol.
9
1547-1560
2017
Amphimedon queenslandica, Drosophila melanogaster, Hydra vulgaris, Nematostella vectensis
Manually annotated by BRENDA team
George, J.T.; Azhar, M.; Aich, M.; Sinha, D.; Ambi, U.B.; Maiti, S.; Chakraborty, D.; Srivatsan, S.G.
Terminal uridylyl transferase mediated site-directed access to clickable chromatin employing CRISPR-dCas9
J. Am. Chem. Soc.
142
13954-13965
2020
Schizosaccharomyces pombe
Manually annotated by BRENDA team
Kim, H.; Kim, J.; Yu, S.; Lee, Y.Y.; Park, J.; Choi, R.J.; Yoon, S.J.; Kang, S.G.; Kim, V.N.
A mechanism for microRNA arm switching regulated by uridylation
Mol. Cell
78
1224-1236
2020
Homo sapiens (Q5TAX3), Homo sapiens (Q5VYS8)
Manually annotated by BRENDA team
Yamashita, S.; Nagaike, T.; Tomita, K.
Crystal structure of the Lin28-interacting module of human terminal uridylyltransferase that regulates let-7 expression
Nat. Commun.
10
1960
2019
Homo sapiens (Q5TAX3), Homo sapiens
Manually annotated by BRENDA team
Yamashita, S.; Takagi, Y.; Nagaike, T.; Tomita, K.
Crystal structures of U6 snRNA-specific terminal uridylyltransferase
Nat. Commun.
8
15788
2017
Homo sapiens (F5H0R1), Homo sapiens
Manually annotated by BRENDA team
Kroupova, A.; Ivascu, A.; Reimao-Pinto, M.M.; Ameres, S.L.; Jinek, M.
Structural basis for acceptor RNA substrate selectivity of the 3 terminal uridylyl transferase Tailor
Nucleic Acids Res.
47
1030-1042
2019
Drosophila melanogaster (Q9VI58)
Manually annotated by BRENDA team
Chung, C.; Jaramillo, J.; Ellis, M.; Bour, D.; Seidl, L.; Jo, D.; Turk, M.; Mann, M.; Bi, Y.; Haniford, D.; Duennwald, M.; Heinemann, I.
RNA surveillance by uridylation-dependent RNA decay in Schizosaccharomyces pombe
Nucleic Acids Res.
47
3045-3057
2019
Schizosaccharomyces pombe, Schizosaccharomyces pombe BG 0000H6
Manually annotated by BRENDA team
Cheng, L.; Li, F.; Jiang, Y.; Yu, H.; Xie, C.; Shi, Y.; Gong, Q.
Structural insights into a unique preference for 3 terminal guanine of mirtron in Drosophila TUTase Tailor
Nucleic Acids Res.
47
495-508
2019
Drosophila melanogaster (Q9VI58)
Manually annotated by BRENDA team
Xu, K.; Lin, J.; Zandi, R.; Roth, J.A.; Ji, L.
MicroRNA-mediated target mRNA cleavage and 3-uridylation in human cells
Sci. Rep.
6
30242
2016
Homo sapiens
Manually annotated by BRENDA team