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Reference on EC 1.9.6.1 - nitrate reductase (cytochrome)

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Sadana, J.C.; McElroy, W.D.
Nitrate reductase from Achromobacter fischeri. Purification and properties: Function of flavines and cytochrome
Arch. Biochem. Biophys.
67
16-34
1957
Aliivibrio fischeri
Manually annotated by BRENDA team
Steward, V.; Lu, Y.; Darwin, A.J.
Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12
J. Bacteriol.
184
1314-1323
2002
Escherichia coli K-12
Manually annotated by BRENDA team
Pittman, M.S.; Kelly, D.J.
Electron transport through nitrate and nitrite reductases in Campylobacter jejuni
Biochem. Soc. Trans.
33
190-192
2005
Campylobacter jejuni
Manually annotated by BRENDA team
Jepson, B.J.; Mohan, S.; Clarke, T.A.; Gates, A.J.; Cole, J.A.; Butler, C.S.; Butt, J.N.; Hemmings, A.M.; Richardson, D.J.
Spectropotentiometric and structural analysis of the periplasmic nitrate reductase from Escherichia coli
J. Biol. Chem.
282
6425-6437
2006
Escherichia coli
Manually annotated by BRENDA team
Nilavongse, A.; Brondijk, T.H.; Overton, T.W.; Richardson, D.J.; Leach, E.R.; Cole, J.A.
The NapF protein of the Escherichia coli periplasmic nitrate reductase system: demonstration of a cytoplasmic location and interaction with the catalytic subunit, NapA
Microbiology
152
3227-3237
2006
Escherichia coli
Manually annotated by BRENDA team
Gates, A.J.; Richardson, D.J.; Butt, J.N.
Voltammetric characterization of the aerobic energy-dissipating nitrate reductase of Paracoccus pantotrophus: exploring the activity of a redox-balancing enzyme as a function of electrochemical potential
Biochem. J.
409
159-168
2008
Paracoccus pantotrophus
Manually annotated by BRENDA team
Coelho, C.; Gonzalez, P.J.; Trincao, J.; Carvalho, A.L.; Najmudin, S.; Hettman, T.; Dieckman, S.; Moura, J.J.; Moura, I.; Romao, M.J.
Heterodimeric nitrate reductase (NapAB) from Cupriavidus necator H16: purification, crystallization and preliminary X-ray analysis
Acta Crystallogr. Sect. F
63
516-519
2007
Cupriavidus necator H16
Manually annotated by BRENDA team
Brondijk, T.H.; Nilavongse, A.; Filenko, N.; Richardson, D.J.; Cole, J.A.
NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: location, topology and physiological roles in quinol oxidation and redox balancing
Biochem. J.
379
47-55
2004
Escherichia coli K-12
Manually annotated by BRENDA team
Berks, B.C.; Ferguson, S.J.; Moir, J.W.; Richardson, D.J.
Enzymes and associated electron transport systems that catalyse the respiratory reduction of nitrogen oxides and oxyanions.
Biochim. Biophys. Acta
1232
97-173
1995
Cupriavidus necator, Escherichia coli, Paracoccus denitrificans, Paracoccus pantotrophus
Manually annotated by BRENDA team
Durvasula, K.; Jantama, K.; Fischer, K.; Vega, A.; Koopman, B.; Svoronos, S.A.
Effect of periplasmic nitrate reductase on diauxic lag of Paracoccus pantotrophus
Biotechnol. Prog.
25
973-979
2009
Paracoccus pantotrophus (Q56350), Paracoccus pantotrophus
Manually annotated by BRENDA team
Berks, B.C.; Richardson, D.J.; Robinson, C.; Reilly, A.; Aplin, R.T.; Ferguson, S.J.
Purification and characterization of the periplasmic nitrate reductase from Thiosphaera pantotropha
Eur. J. Biochem.
220
117-124
1994
Paracoccus pantotrophus
Manually annotated by BRENDA team
Sears, H.J.; Ferguson, S.J.; Richardson, D.J.; Spiro, S.
The identification of a periplasmic nitrate reductase in Paracoccus denitrificans
FEMS MIcrobiol. Lett.
113
107-112
1993
Paracoccus denitrificans
-
Manually annotated by BRENDA team
Thomas, G.; Potter, L.; Cole, J.A.
The periplasmic nitrate reductase from Escherichia coli: a heterodimeric molybdoprotein with a double-arginine signal sequence and an unusual leader peptide cleavage site
FEMS Microbiol. Lett.
174
167-171
1999
Escherichia coli K-12 (P33937 and P0ABL3)
Manually annotated by BRENDA team
Siddiqui, R.A.; Warnecke-Eberz, U.; Hengsberger, A.; Schneider, B.; Kostka, S.; Friedrich, B.
Structure and function of a periplasmic nitrate reductase in Alcaligenes eutrophus H16
J. Bacteriol.
175
5867-5876
1993
Cupriavidus necator, Cupriavidus necator H16 / ATCC 23440 / NCIB 10442 / S-10-1
Manually annotated by BRENDA team
Wang, H.; Tseng, C.P.; Gunsalus, R.P.
The napF and narG nitrate reductase operons in Escherichia coli are differentially expressed in response to submicromolar concentrations of nitrate but not nitrite
J. Bacteriol.
181
5303-5308
1999
Escherichia coli
Manually annotated by BRENDA team
Stewart, V.; Bledsoe, P.J.; Chen, L.L.; Cai, A.
Catabolite repression control of napF (periplasmic nitrate reductase) operon expression in Escherichia coli K-12
J. Bacteriol.
191
996-1005
2009
Paracoccus pantotrophus
Manually annotated by BRENDA team
Hofmann, M.
Density functional theory study of model complexes for the revised nitrate reductase active site in Desulfovibrio desulfuricans NapA
J. Biol. Inorg. Chem.
14
1023-1035
2009
Desulfovibrio desulfuricans
Manually annotated by BRENDA team
Cerqueira, N.M.; Gonzalez, P.J.; Brondino, C.D.; Romao, M.J.; Romao, C.C.; Moura, I.; Moura, J.J.
The effect of the sixth sulfur ligand in the catalytic mechanism of periplasmic nitrate reductase
J. Comput. Chem.
30
2466-2484
2009
Desulfovibrio desulfuricans
Manually annotated by BRENDA team
Brondijk, T.H.; Fiegen, D.; Richardson, D.J.; Cole, J.A.
Roles of NapF, NapG and NapH, subunits of the Escherichia coli periplasmic nitrate reductase, in ubiquinol oxidation
Mol. Microbiol.
44
245-255
2002
Escherichia coli K-12
Manually annotated by BRENDA team
Van Alst, N.E.; Sherrill, L.A.; Iglewski, B.H.; Haidaris, C.G.
Compensatory periplasmic nitrate reductase activity supports anaerobic growth of Pseudomonas aeruginosa PAO1 in the absence of membrane nitrate reductase
Can. J. Microbiol.
55
1133-1144
2009
Pseudomonas aeruginosa
Manually annotated by BRENDA team
Simpson, P.J.; Richardson, D.J.; Codd, R.
The periplasmic nitrate reductase in Shewanella: the resolution, distribution and functional implications of two NAP isoforms, NapEDABC and NapDAGHB
Microbiology
156
302-312
2010
Shewanella putrefaciens, Shewanella oneidensis, Shewanella sp., Shewanella frigidimarina, Shewanella halifaxensis, Shewanella loihica, Shewanella pealeana, Shewanella piezotolerans, Shewanella sediminis, Shewanella woodyi, Shewanella denitrificans, Shewanella amazonensis, Shewanella baltica, Shewanella piezotolerans WP3, Shewanella putrefaciens CN-32, Shewanella baltica OS195, Shewanella sp. ANA-3, Shewanella baltica OS223, Shewanella sp. W3-18-1, Shewanella denitrificans OS217, Shewanella baltica OS155, Shewanella loihica PV-4, Shewanella sp. MR-4, Shewanella oneidensis MR-1 / ATCC 700550, Shewanella baltica OS185, Shewanella sp. MR-7, Shewanella amazonensis SB2B
Manually annotated by BRENDA team
Cerqueira, N.M.; Gonzalez, P.J.; Fernandes, P.A.; Moura, J.J.; Ramos, M.J.
Periplasmic nitrate reductase and formate dehydrogenase similar molecular architectures with very different enzymatic activities
Acc. Chem. Res.
48
2875-2884
2015
Methylotenera mobilis (C6WXA3), Desulfovibrio desulfuricans (P81186), Methylotenera mobilis JLW8 (C6WXA3)
Manually annotated by BRENDA team
Jacques, J.G.; Burlat, B.; Arnoux, P.; Sabaty, M.; Guigliarelli, B.; Leger, C.; Pignol, D.; Fourmond, V.
Kinetics of substrate inhibition of periplasmic nitrate reductase
Biochim. Biophys. Acta
1837
1801-1809
2014
Cereibacter sphaeroides (Q53176), Cereibacter sphaeroides DSM 158 (Q53176)
Manually annotated by BRENDA team
Gonzalez, P.; Rivas, M.; Mota, C.; Brondino, C.; Moura, I.; Moura, J.
Periplasmic nitrate reductases and formate dehydrogenases biological control of the chemical properties of Mo and W for fine tuning of reactivity, substrate specificity and metabolic role
Coord. Chem. Rev.
257
315-331
2013
Bradyrhizobium japonicum, Shewanella oneidensis, Wolinella succinogenes, Desulfitobacterium hafniense (A0A098B5Y5), Paracoccus denitrificans (A1BB88), Shewanella gelidimarina (E2F391), Escherichia coli (P33937), Cupriavidus necator (P39185), Desulfovibrio desulfuricans (P81186), Anaeromyxobacter dehalogenans (Q2IPE7), Cereibacter sphaeroides (Q53176), Paracoccus pantotrophus (Q56350), Campylobacter jejuni subsp. jejuni (Q9PPD9), Pseudomonas sp. (Q9RC05), Campylobacter jejuni subsp. jejuni ATCC 700819 (Q9PPD9), Cupriavidus necator H16 / ATCC 23440 / NCIB 10442 / S-10-1 (P39185), Pseudomonas sp. G-179 (Q9RC05), Paracoccus pantotrophus GB17 (Q56350)
-
Manually annotated by BRENDA team
Sanchez, C.; Itakura, M.; Okubo, T.; Matsumoto, T.; Yoshikawa, H.; Gotoh, A.; Hidaka, M.; Uchida, T.; Minamisawa, K.
The nitrate-sensing NasST system regulates nitrous oxide reductase and periplasmic nitrate reductase in Bradyrhizobium japonicum
Environ. Microbiol.
16
3263-3274
2014
Bradyrhizobium japonicum (Q89EN5), Bradyrhizobium japonicum, Bradyrhizobium japonicum JCM 10833 (Q89EN5)
Manually annotated by BRENDA team
Dow, J.M.; Grahl, S.; Ward, R.; Evans, R.; Byron, O.; Norman, D.G.; Palmer, T.; Sargent, F.
Characterization of a periplasmic nitrate reductase in complex with its biosynthetic chaperone
FEBS J.
281
246-260
2014
Escherichia coli (P33937), Escherichia coli
Manually annotated by BRENDA team
Lopez, C.A.; Rivera-Chavez, F.; Byndloss, M.X.; Baeumler, A.J.
The periplasmic nitrate reductase NapABC supports luminal growth of Salmonella enterica serovar typhimurium during colitis
Infect. Immun.
83
3470-3478
2015
Salmonella enterica, Salmonella enterica SL1344 AND CAL128
Manually annotated by BRENDA team
Cerqueira, N.M.; Fernandes, P.A.; Gonzalez, P.J.; Moura, J.J.; Ramos, M.J.
The sulfur shift an activation mechanism for periplasmic nitrate reductase and formate dehydrogenase
Inorg. Chem.
52
10766-10772
2013
Desulfovibrio desulfuricans (P81186)
Manually annotated by BRENDA team
Zeamari, K.; Gerbaud, G.; Grosse, S.; Fourmond, V.; Chaspoul, F.; Biaso, F.; Arnoux, P.; Sabaty, M.; Pignol, D.; Guigliarelli, B.; Burlat, B.
Tuning the redox properties of a [4Fe-4S] center to modulate the activity of Mo-bisPGD periplasmic nitrate reductase
Biochim. Biophys. Acta Bioenerg.
1860
402-413
2019
Cereibacter sphaeroides f. sp. denitrificans (O88111 and O88160)
Manually annotated by BRENDA team
Eltarahony, M.; Zaki, S.; Kheiralla, Z.; Abd-El-Haleem, D.
NAP enzyme recruitment in simultaneous bioremediation and nanoparticles synthesis
Biotechnol. Rep.
18
e00257
2018
Achromobacter sp. MMT
Manually annotated by BRENDA team
Lecomte, S.; Nesme, X.; Franzino, T.; Villard, C.; Pivard, M.; Vial, L.; Dore, J.; Hommais, F.; Haichar, F.
Agrobacterium fabrum C58 involved nitrate reductase NapA and antisense RNA NorR to denitrify
FEMS Microbiol. Ecol.
97
fiaa233
2021
Agrobacterium fabrum (Q8U7P1), Agrobacterium fabrum, Agrobacterium fabrum C58 (Q8U7P1), Agrobacterium fabrum C58
Manually annotated by BRENDA team
Mintmier, B.; McGarry, J.M.; Sparacino-Watkins, C.E.; Sallmen, J.; Fischer-Schrader, K.; Magalon, A.; McCormick, J.R.; Stolz, J.F.; Schwarz, G.; Bain, D.J.; Basu, P.
Molecular cloning, expression and biochemical characterization of periplasmic nitrate reductase from Campylobacter jejuni
FEMS Microbiol. Lett.
365
fny151
2018
Campylobacter jejuni (Q5HV12), Campylobacter jejuni, Campylobacter jejuni RM1221 (Q5HV12)
Manually annotated by BRENDA team
Siqueira, A.; Sugawara, M.; Arashida, H.; Minamisawa, K.; Sanchez, C.
Levels of periplasmic nitrate reductase during denitrification are lower in Bradyrhizobium japonicum than in Bradyrhizobium diazoefficiens
Microbes Environ.
35
1-5
2020
Bradyrhizobium diazoefficiens (Q89EN5), Bradyrhizobium diazoefficiens, Bradyrhizobium japonicum (Q8KY07), Bradyrhizobium japonicum, Bradyrhizobium diazoefficiens USDA 110 (Q89EN5)
Manually annotated by BRENDA team