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Reference on EC 1.3.7.5 - phycocyanobilin:ferredoxin oxidoreductase

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Frankenberg, N.; Mukougawa, K.; Kohchi, T.; Lagarias, J.C.
Functional genomic analysis of the HY2 family of ferredoxin-dependent bilin reductases from oxygenic photosynthetic organisms
Plant Cell
13
965-978
2001
Anabaena sp., Prochlorococcus sp., Synechococcus sp., Synechocystis sp. (Q55891), Nostoc punctiforme (Q93TM9), Prochlorococcus sp. CCMP1378 / MED4, Synechococcus sp. WH8102
Manually annotated by BRENDA team
Tooley, A.J.; Glazer, A.N.
Biosynthesis of the cyanobacterial light-harvesting polypeptide phycoerythrocyanin holo-a subunit in a heterologous host
J. Bacteriol.
184
4666-4671
2002
Anabaena sp.
Manually annotated by BRENDA team
Tooley, A.J.; Cai, Y.A.; Glazer, A.N.
Biosynthesis of a fluorescent cyanobacterial C-phycocyanin holo-a subunit in a heterologous host
Proc. Natl. Acad. Sci. USA
98
10560-10565
2001
Synechocystis sp.
Manually annotated by BRENDA team
Wu, S.H; McDowell, M.T.; Lagaris, J.C.
Phycocyanobilin is the natural precursor of the phytochrome chromophore in the green alga Mesotaenium caldariorum
J. Biol. Chem.
272
25700-25705
1997
Mesotaenium caldariorum
Manually annotated by BRENDA team
Tu, S.L.; Gunn, A.; Toney, M.D.; Britt, R.D.; Lagarias, J.C.
Biliverdin reduction by cyanobacterial phycocyanobilin:ferredoxin oxidoreductase (PcyA) proceeds via linear tetrapyrrole radical intermediates
J. Am. Chem. Soc.
126
8682-8693
2004
Anabaena sp.
Manually annotated by BRENDA team
Frankenberg, N.; Lagarias, J.C.
Phycocyanobilin:ferredoxin oxidoreductase of Anabaena sp. PCC 7120. Biochemical and spectroscopic
J. Biol. Chem.
278
9219-9226
2003
Anabaena sp.
Manually annotated by BRENDA team
Kami, C.; Mukougawa, K.; Muramoto, T.; Yokota, A.; Shinomura, T.; Lagarias, J.C.; Kohchi, T.
Complementation of phytochrome chromophore-deficient Arabidopsis by expression of phycocyanobilin:ferredoxin oxidoreductase
Proc. Natl. Acad. Sci. USA
101
1099-1104
2004
Synechocystis sp.
Manually annotated by BRENDA team
Mukougawa, K.; Kanamoto, H.; Kobayashi, T.; Yokota, A.; Kohchi, T.
Metabolic engineering to produce phytochromes with phytochromobilin, phycocyanobilin, or phycoerythrobilin chromophore in Escherichia coli
FEBS Lett.
580
1333-1338
2006
Synechococcus sp., Synechococcus sp. W8020
Manually annotated by BRENDA team
Hagiwara, Y.; Sugishima, M.; Takahashi, Y.; Fukuyama, K.
Induced-fitting and electrostatic potential change of PcyA upon substrate binding demonstrated by the crystal structure of the substrate-free form
FEBS Lett.
580
3823-3828
2006
Synechocystis sp.
Manually annotated by BRENDA team
Tu, S.L.; Sughrue, W.; Britt, R.D.; Lagarias, J.C.
A conserved histidine-aspartate pair is required for exovinyl reduction of biliverdin by a cyanobacterial phycocyanobilin:ferredoxin oxidoreductase
J. Biol. Chem.
281
3127-3136
2006
Nostoc sp., Nostoc sp. PCC 7120
Manually annotated by BRENDA team
Zhao, K.H.; Su, P.; Li, J.; Tu, J.M.; Zhou, M.; Bubenzer, C.; Scheer, H.
Chromophore attachment to phycobiliprotein beta-subunits: phycocyanobilin:cysteine-beta84 phycobiliprotein lyase activity of CpeS-like protein from Anabaena Sp. PCC7120
J. Biol. Chem.
281
8573-8581
2006
Anabaena sp., Anabaena sp. PCC 7120
Manually annotated by BRENDA team
Hagiwara, Y.; Sugishima, M.; Takahashi, Y.; Fukuyama, K.
Crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phycocyanobilin
Proc. Natl. Acad. Sci. USA
103
27-32
2006
Synechocystis sp. (Q55891), Synechocystis sp.
Manually annotated by BRENDA team
Tu, S.L.; Rockwell, N.C.; Lagarias, J.C.; Fisher, A.J.
Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements
Biochemistry
46
1484-1494
2007
Nostoc sp. PCC 7120 = FACHB-418 (Q93TN0)
Manually annotated by BRENDA team
Zhang, W.; Guan, X.; Yang, Y.; Ge, B.; Chen, H.; Li, F.; Qin, S.
Biosynthesis of fluorescent allophycocyanin alpha-subunits by autocatalysis in Escherichia coli
Biotechnol. Appl. Biochem.
52
135-140
2009
Synechocystis sp. (Q55891)
Manually annotated by BRENDA team
Stoll, S.; Gunn, A.; Brynda, M.; Sughrue, W.; Kohler, A.C.; Ozarowski, A.; Fisher, A.J.; Lagarias, J.C.; Britt, R.D.
Structure of the biliverdin radical intermediate in phycocyanobilin:ferredoxin oxidoreductase identified by high-field EPR and DFT
J. Am. Chem. Soc.
131
1986-1995
2009
Synechocystis sp. (Q55891), Synechocystis sp., Nostoc sp. PCC 7120 = FACHB-418 (Q93TN0)
Manually annotated by BRENDA team
Wada, K.; Hagiwara, Y.; Yutani, Y.; Fukuyama, K.
One residue substitution in PcyA leads to unexpected changes in tetrapyrrole substrate binding
Biochem. Biophys. Res. Commun.
402
373-377
2010
Synechocystis sp. (Q55891)
Manually annotated by BRENDA team
Okada, K.
HO1 and PcyA proteins involved in phycobilin biosynthesis form a 1:2 complex with ferredoxin-1 required for photosynthesis
FEBS Lett.
583
1251-1256
2009
Thermosynechococcus vestitus
Manually annotated by BRENDA team
Hagiwara, Y.; Sugishima, M.; Khawn, H.; Kinoshita, H.; Inomata, K.; Shang, L.; Lagarias, J.C.; Takahashi, Y.; Fukuyama, K.
Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA)
J. Biol. Chem.
285
1000-1007
2010
Synechocystis sp. (Q55891), Synechocystis sp.
Manually annotated by BRENDA team
Kabasakal, B.; Gae, D.D.; Li, J.; Clark Lagarias, J.; Koehl, P.; Fisher, A.J.
His74 conservation in the bilin reductase PcyA family reflects an important role in protein-substrate structure and dynamics
Arch. Biochem. Biophys.
537
233-242
2013
Synechocystis sp.
Manually annotated by BRENDA team
Shang, L.; Rockwell, N.C.; Martin, S.S.; Lagarias, J.C.
Biliverdin amides reveal roles for propionate side chains in bilin reductase recognition and in holophytochrome assembly and photoconversion
Biochemistry
49
6070-6082
2010
Anabaena sp., Anabaena sp. PCC 7120
Manually annotated by BRENDA team
Kohler, A.C.; Gae, D.D.; Richley, M.A.; Stoll, S.; Gunn, A.; Lim, S.; Martin, S.S.; Doukov, T.I.; Britt, R.D.; Ames, J.B.; Lagarias, J.C.; Fisher, A.J.
Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants
Biochemistry
49
6206-6218
2010
Synechocystis sp.
Manually annotated by BRENDA team
Alvey, R.M.; Biswas, A.; Schluchter, W.M.; Bryant, D.A.
Attachment of noncognate chromophores to CpcA of Synechocystis sp. PCC 6803 and Synechococcus sp. PCC 7002 by heterologous expression in Escherichia coli
Biochemistry
50
4890-4902
2011
Synechococcus sp., Synechococcus sp. 7002
Manually annotated by BRENDA team
Alvey, R.M.; Biswas, A.; Schluchter, W.M.; Bryant, D.A.
Effects of modified phycobilin biosynthesis in the cyanobacterium Synechococcus sp. strain PCC 7002
J. Bacteriol.
193
1663-1671
2011
Synechococcus sp.
Manually annotated by BRENDA team
Ceron-Carrasco, J.; Jacquemin, D.; Laurent, A.
First computational step towards the understanding of the antioxidant activity of the phycocyanobilin ferredoxin oxidoreductase in complex with biliverdin IXalpha
Comput. Theoret. Chem.
1077
58-64
2016
Synechocystis sp. PCC 6803 (Q55891)
-
Manually annotated by BRENDA team
Hagiwara, Y.; Wada, K.; Irikawa, T.; Sato, H.; Unno, M.; Yamamoto, K.; Fukuyama, K.; Sugishima, M.
Atomic-resolution structure of the phycocyanobilin ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin
FEBS Lett.
590
3425-3434
2016
Synechocystis sp. PCC 6803 (Q55891)
Manually annotated by BRENDA team
Iijima, E.; Gleeson, M.; Unno, M.; Mori, S.
QM/MM investigation for protonation states in a bilin reductase PcyA-biliverdin IXalpha complex
ChemPhysChem
19
1809-1813
2018
Synechocystis sp. PCC 6803 (Q55891)
Manually annotated by BRENDA team
Miyake, K.; Fushimi, K.; Kashimoto, T.; Maeda, K.; Ni-Ni-Win, K.; Kimura, H.; Sugishima, M.; Ikeuchi, M.; Narikawa, R.
Functional diversification of two bilin reductases for light perception and harvesting in unique cyanobacterium Acaryochloris marina MBIC 11017
FEBS J.
287
4016-4031
2020
Acaryochloris marina (A8ZMS5), Acaryochloris marina (B0CAR8), Acaryochloris marina, Synechocystis sp. PCC 6803 (Q55891), Acaryochloris marina MBIC 11017 (A8ZMS5), Acaryochloris marina MBIC 11017 (B0CAR8)
Manually annotated by BRENDA team
Zhang, W.; Zhong, H.; Lu, H.; Zhang, Y.; Deng, X.; Huang, K.; Duanmu, D.
Characterization of ferredoxin-dependent biliverdin reductase PCYA1 reveals the dual function in retrograde bilin biosynthesis and interaction with light-dependent protochlorophyllide oxidoreductase LPOR in Chlamydomonas reinhardtii
Front. Plant Sci.
9
676
2018
Chlamydomonas reinhardtii (A8HUP3), Chlamydomonas reinhardtii, Chlamydomonas reinhardtii 4A+ (A8HUP3)
Manually annotated by BRENDA team