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1.1.3.30
pva-degrading
sphingopyxis
pqq
pyrroloquinoline
quinone
symbiotic
symbionts
flask
quinone-dependent
shake
sphingomonads
biodegradability
pqq-binding
hexahistidine
cell-associated
beta-diketone
gly-x-ser-x-gly
sludge
polypropylene
pqq-dependent
depolymerized
depolymerases
ppic9k
pmsf
diketone
dehydrogenation
low-molecular-weight
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota
Synonyms
pvadh, pva oxidase, pva dehydrogenase, polyvinyl alcohol dehydrogenase,
more
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dehydrogenase, polyvinyl alcohol
-
-
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periplasmic poly(vinyl alcohol) dehydrogenase
-
polyvinyl alcohol dehydrogenase
-
-
PVA oxidase
-
-
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PVA oxidase
no activity in Rhodococcus erythropolis
-
-
PVADH
-
-
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polyvinyl alcohol + O2 = oxidized polyvinyl alcohol + H2O2
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polyvinyl-alcohol:oxygen oxidoreductase
-
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1,3-butanediol + O2
1,3-butanedione + H2O2
-
3.8% of activity with polyvinyl alcohol
-
?
1,3-butanediol + O2
?
low activity
-
?
2,4-pentanediol + O2
2,4-pentanedione + H2O2
-
19.3% of activity with polyvinyl alcohol
-
?
2,4-pentanediol + O2
?
low activity
-
?
2,5-hexanediol + O2
2,5-hexanedione + H2O2
2-butanol + O2
2-butanone + H2O2
-
47.3% of activity with polyvinyl alcohol
-
?
2-hexanol + O2
2-hexanone + H2O2
2-pentanol + O2
2-pentanone + H2O2
2-propanol + O2
acetone + H2O2
3-butanol + O2
3-butanone + H2O2
-
14.6% of activity with polyvinyl alcohol
-
?
3-heptanol + O2
3-heptanone + H2O2
-
68.8% of activity with polyvinyl alcohol
-
?
3-hexanol + O2
3-hexanone + H2O2
-
47.3% of activity with polyvinyl alcohol
-
?
4-decanol + O2
4-decanone + H2O2
-
100% of activity with polyvinyl alcohol
-
?
4-heptanol + O2
4-heptanone + H2O2
benzyl alcohol + O2
benzaldehyde + H2O2
-
13.7% of activity with polyvinyl alcohol
-
?
cyclohexanediol + O2
?
low activity
-
?
cyclohexanol + O2
cyclohexanal + H2O2
-
41.8% of activity with polyvinyl alcohol
-
?
polypropylene glycol + O2
?
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
pyrroloquinoline quinone + O2
?
low activity
-
?
additional information
?
-
no activity with primary nor secondary alcohols
-
?
2,5-hexanediol + O2
2,5-hexanedione + H2O2
-
3.8% of activity with polyvinyl alcohol
-
?
2,5-hexanediol + O2
2,5-hexanedione + H2O2
-
4.9% of activity with polyvinyl alcohol
-
?
2-hexanol + O2
2-hexanone + H2O2
-
65.4% of activity with polyvinyl alcohol
-
?
2-hexanol + O2
2-hexanone + H2O2
-
101% of activity with polyvinyl alcohol
-
?
2-hexanol + O2
2-hexanone + H2O2
-
101% of activity with polyvinyl alcohol
-
?
2-pentanol + O2
2-pentanone + H2O2
-
36.3% of activity with polyvinyl alcohol
-
?
2-pentanol + O2
2-pentanone + H2O2
-
58% of activity with polyvinyl alcohol
-
?
2-pentanol + O2
2-pentanone + H2O2
-
58% of activity with polyvinyl alcohol
-
?
2-propanol + O2
acetone + H2O2
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3.5% of activity with polyvinyl alcohol
-
?
2-propanol + O2
acetone + H2O2
-
4.9% of activity with polyvinyl alcohol
-
?
2-propanol + O2
acetone + H2O2
-
4.9% of activity with polyvinyl alcohol
-
?
4-heptanol + O2
4-heptanone + H2O2
-
75.1% of activity with polyvinyl alcohol
-
?
4-heptanol + O2
4-heptanone + H2O2
-
91% of activity with polyvinyl alcohol
-
?
4-heptanol + O2
4-heptanone + H2O2
-
91% of activity with polyvinyl alcohol
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
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-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
symbiotic biodegradation of polyvinyl alcohol, measured by hydrogen peroxide production
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
the enzyme is involved in polyvinyl alcohol-degradation
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
substrate PVA117
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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fluorescein-labelled and unlabelled polyvinyl alcohol, degradation after uptake into the periplasm, associated with ultrastructural changes of cell surface
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
pva operon characterized
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
the enzyme is involved in polyvinyl alcohol-degradation
-
?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
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?
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polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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the enzyme is involved in polyvinyl alcohol-degradation
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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the enzyme is involved in polyvinyl alcohol-degradation
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
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-
-
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?
polyvinyl alcohol + O2
oxidized polyvinyl alcohol + H2O2
-
-
-
-
?
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additional information
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no requirement for pyrroloquinoline quinone (PQQ) as does the PQQ-dependent PVA dehydrogenase
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additional information
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no requirement for pyrroloquinoline quinone (PQQ) as does the PQQ-dependent PVA dehydrogenase
-
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Fe2+
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1 mol iron/mol enzyme
Mg2+
activates, the activation by Mg2+ is less than 80% of the activation by Ca2+
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EDTA
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1 mM, 23% inhibition
Fe2+
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1 mM, 88% inhibition
Hg2+
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1 mM, 93% inhibition
Sn2+
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1 mM, 89% inhibition
Thiourea
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1 mM, 20% inhibition
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pyrroloquinoline quinone
-
essential for polyvinyl alcohol degradation, another yet unknown growth factor supplied by co-isolated Rhodococcus erythropolis strain
pyrroloquinoline quinone
absolutely required for activity, one mole of PQQ is bound to one mole of apoenzyme
pyrroloquinoline quinone
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i.e. PQQ, supplemented with polyvinyl alcohol medium at 1 mg/l
additional information
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the enzyme is induced by polyvinyl alcohol
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additional information
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the enzyme is induced by polyvinyl alcohol in strain O3, but is constitutive in strain VM15C
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additional information
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the enzyme is induced by polyvinyl alcohol
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0.0018
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in association with the co-isolated Rhodococcus erythropolis strain, isolate able to degrade 500 mg of polyvinyl alcohol per litre in 2 weeks, no activity on 2-butanol, 2,4-pentanediol, 2-hexanol, 2-heptanol detected
18
purified recombinant enzyme, substrate PVA117
additional information
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degradation of polyvinyl alcohol measured by iodometry, polyvinyl alcohol oxidase assay, ultrastructural change on the cell surface in polyvinyl alcohol-containing media shown by Scanning electron microscopy, binding studies of fluorescein-labelled polyvinyl alcohol onto the cell surface, induction of structural surface changes by polyvinyl alcohol identifed
additional information
upstream and downstream regions of pva operon sequenced, transcript start and operon size, location on megaplasmid and constitutive expression shown, periplasmic enzyme activities from cells grown in polyvinyl alcohol medium and glucose medium compared, increased expression by addition of polyvinyl alcohol
additional information
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upstream and downstream regions of pva operon sequenced, transcript start and operon size, location on megaplasmid and constitutive expression shown, periplasmic enzyme activities from cells grown in polyvinyl alcohol medium and glucose medium compared, increased expression by addition of polyvinyl alcohol
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7.2 - 7.4
dependent on buffer system, recombinant enzyme
7.2
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assay at
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7 - 11
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almost constant activity in this range
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30
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assay at
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no activity in Alcaligenes faecalis
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no activity in Alcaligenes faecalis KK314
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no activity in Pseudomonas sp.
strain N1
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no activity in Pseudomonas sp. VM15C
strain N1
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no activity in Rhodococcus erythropolis
but supports growth and degradation of polyvinyl alcohol by Sphingomonas sp.
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var. povalolyticus PH
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in symbiotic culture with Pseudomonas putida during PVA utilization
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strains O3, VM15C, and A-41
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CCM 7450, growth and PVA degradation supported by co-isolated strain Rhodococcus erythropolis OT3
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strains TJ7 and SA3
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gene pvadh; gene pvadh or pvaA
SwissProt
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polyvinyl alcohol dehydrogenase, part of pva operon
SwissProt
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reidentified from Sphingomonas sp. strain 113P3 by taxonomic analysis
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strain PVA3, no activity in strain 113P3
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additional information
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strain BX1 grows on PVA as a mixed culture with another strain PN19. Strain BX1 has PVA oxidase activity but has no PQQ-dependent PVA-DH and the mixed culture accumulates depolymerized PVA in the culture supernatant
brenda
additional information
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strain BX1 grows on PVA as a mixed culture with another strain PN19. Strain BX1 has PVA oxidase activity but has no PQQ-dependent PVA-DH and the mixed culture accumulates depolymerized PVA in the culture supernatant
brenda
additional information
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the enzyme is induced by polyvinyl alcohol in strain O3, but is constitutive in strain VM15C
brenda
additional information
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the organism grows on polyvinyl alcohol, n-butanol, n-pentanol, n-hexanol, n-heptanol, n-tridecanol, n-tetradecanol, and n-hexadecanol as sole carbon source, but not on aromatic and alkane compounds
brenda
additional information
-
the organism grows on polyvinyl alcohol, n-butanol, n-pentanol, n-hexanol, n-heptanol, n-tridecanol, n-tetradecanol, and n-hexadecanol as sole carbon source, but not on aromatic and alkane compounds
brenda
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additional information
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activity associated with cells of co-isolated degrader strain Rhodococcus erythropolis
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amount depending on growth rate
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amount depending on growth rate
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amount depending on growth rate
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the enzyme is excreted
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the enzyme is excreted
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membrane-bound amount depending on growth rate, 50% of enzyme activity is localized on cytoplasmic membrane
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membrane-bound amount depending on growth rate, 50% of enzyme activity is localized on cytoplasmic membrane
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membrane-bound amount depending on growth rate, 50% of enzyme activity is localized on cytoplasmic membrane
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extracellular or cell-associated enzyme activity undetectable in strain 113P3
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PVADH_SPHS1
Sphingopyxis sp. (strain 113P3)
654
0
69486
Swiss-Prot
-
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68000
recombinant enzyme, gel filtration
85000
-
1 * 85000, SDS-PAGE
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additional information
the enzyme possesses a conserved superbarrel domain SD, probable PQQ-binding amino acids in the SD and a hem-binding domain HBD
monomer
-
1 * 85000, SDS-PAGE
monomer
1 * 68000, recombinant enzyme, SDS-PAGE
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6 - 10
-
stable for at least 24 h at 30°C
287626
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45
-
stable for 30 min, complete loss of activity after 30 min at 60°C
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4°C, purified recombinant enzyme, 20 mM Tris/HCl buffer, pH 8.0, stable for more than a month
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ammonium sulfate precipitation and Q-Sepharose column chromatography
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native enzyme from strain O3
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native enzyme from strain PD
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Q-Sepharose, AF blue Toyopearl, Q-Sepharose
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recombinant His6-tagged enzyme from Escherichia coli 44fold to homogeneity
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expressed in Escherichia coli, pCR-XL-TOPO vector
gene pvadh, DNA and amino acid sequence determination and analysis, sequence comparison, expression of His6-tagged enzyme in Escherichia coli
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Shimao, M.; Nishimura, Y.; Kato, N.; Sakazawa, C.
Localization of polyvinyl alcohol oxidase produced by a bacterial symbiont, Pseudomonas sp. strain VM15C
Appl. Environ. Microbiol.
49
8-10
1985
Pseudomonas sp.
brenda
Shimao, M.; Onishi, S.; Kato, N.; Sakazawa, C.
Pyrroloquinoline quinone-dependent cytochrome reduction in polyvinyl alcohol-degrading Pseudomonas sp. strain VM15C
Appl. Environ. Microbiol.
55
275-278
1989
no activity in Pseudomonas sp., Pseudomonas sp., no activity in Pseudomonas sp. VM15C
brenda
Shimao, M.; Ninomiyaaa, K.; Kuno, O.; Kato, N.; Sakazawa, C.
Existence of a novel enzyme, pyrroloquinoline quinone-dependent polyvinyl alcohol dehydrogenase, in a bacterial symbiont, Pseudomonas sp. strain VM15C
Appl. Environ. Microbiol.
51
268-275
1986
Pseudomonas sp.
brenda
Kawagoshi, Y.; Fujita, M.
Purification and properties of polyvinyl alcohol oxidase with broad substrate range obtained from Pseudomonas vesicularis var. povalolyticus PH
World J. Microbiol. Biotechnol.
13
273-277
1997
Brevundimonas vesicularis
-
brenda
Yamatsu, A.; Matsumi, R.; Atomi, H.; Imanaka, T.
Isolation and characterization of a novel poly(vinyl alcohol)-degrading bacterium, Sphingopyxis sp. PVA3
Appl. Microbiol. Biotechnol.
72
804-811
2006
Sphingopyxis sp., Sphingopyxis sp. PVA3
brenda
Hirota-Mamoto, R.; Nagai, R.; Tachibana, S.; Yasuda, M.; Tani, A.; Kimbara, K.; Kawai, F.
Cloning and expression of the gene for periplasmic poly(vinyl alcohol) dehydrogenase from Sphingomonas sp. strain 113P3, a novel-type quinohaemoprotein alcohol dehydrogenase
Microbiology
152
1941-1949
2006
Sphingopyxis sp. (Q588Z1)
brenda
Vaclavkova, T.; Ruzicka, J.; Julinova, M.; Vicha, R.; Koutny, M.
Novel aspects of symbiotic (polyvinyl alcohol) biodegradation
Appl. Microbiol. Biotechnol.
76
911-917
2007
Sphingomonas sp., no activity in Rhodococcus erythropolis
brenda
Hu, X.; Mamoto, R.; Fujioka, Y.; Tani, A.; Kimbara, K.; Kawai, F.
The pva operon is located on the megaplasmid of Sphingopyxis sp. strain 113P3 and is constitutively expressed, although expression is enhanced by PVA
Appl. Microbiol. Biotechnol.
78
685-693
2008
Sphingopyxis sp. (Q588Z1), Sphingopyxis sp.
brenda
Hu, X.; Mamoto, R.; Shimomura, Y.; Kimbara, K.; Kawai, F.
Cell surface structure enhancing uptake of polyvinyl alcohol (PVA) is induced by PVA in the PVA-utilizing Sphingopyxis sp. strain 113P3
Arch. Microbiol.
188
235-241
2007
Sphingopyxis sp.
brenda
Kawai, F.; Hu, X.
Biochemistry of microbial polyvinyl alcohol degradation
Appl. Microbiol. Biotechnol.
84
227-237
2009
Microbacterium barkeri, Paenibacillus amylolyticus, Bacillus megaterium, Brevundimonas vesicularis, Penicillium sp., Geotrichum sp., no activity in Alcaligenes faecalis, Pseudomonas sp., Sphingomonas sp., Streptomyces venezuelae, Sphingopyxis sp., no activity in Alcaligenes faecalis KK314, Brevundimonas vesicularis PD, Brevundimonas vesicularis PH, Streptomyces venezuelae GY1, Bacillus megaterium BX1, Geotrichum sp. WF9101, Microbacterium barkeri KCCM10507, Paenibacillus amylolyticus KCCM 10508, Penicillium sp. WSH02-21
brenda
Li, M.; Du, G.
Purification and enzymatic properties of polyvinyl alcohol dehydrogenase
Chin. J. Proc. Engin.
14
1015-1019
2014
Bacillus megaterium
-
brenda
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