Fulltext Search ontologies
(tissue, processes, functions, components)
Enter your searchterm (use
AND
,
OR
,
AND NOT
for simple Boolean queries)
contains
exact
begins with
ends with
use * as wildcard
regular expression
Search in all ontologies
or
search only in
selected ontologies
anatomy
BTO (BRENDA Tissue Ontology)
Plant Structure Ontology
Maize gross anatomy
eVOC - Anatomical System
Fungal gross anatomy
Zebrafish anatomy and development
Drosophila gross anatomy
Mosquito gross anatomy
Mouse adult gross anatomy
Dictyostelium discoideum anatomy
Arabidopsis gross anatomy
eVOC - Cell type
others
Gene ontology
Biological imaging methods
Medical Subject Headings (MeSH)
Signalling Pathway ontology
Systems Biology
Event (INOH pathway ontology)
Molecule role
(INOH Protein name/family name ontology)
FlyBase Controlled Vocabulary
chemical
Chemical entities of biological interest
Physico-chemical process
Physical-chemical methods and properties
Physico-chemical process
development
Arabidopsis development
Drosophila development
Human developmental anatomy
(timed version)
Human dev. anatomy, abstract version
Cereals growth and developmental stage
Medaka fish anatomy and development
Mouse gross anatomy and development
C. elegans development
eVOC - Development Stage
Cereal plant trait
genomic and proteomic
Protein-protein interaction
Sequence types and features
phenotype
Human disease
Mouse pathology
Mammalian phenotype
Plant environmental conditions
Phenotypic qualities
(hold the ctrl-key to select more than one field)
Examples
Click
to start the examples
Different search modes
Click the icons to start example search!
link
Description
exact
Find
exact
'liver'
in all ontologies
contains
Find all fields which
contains
'apoptosis'
in all ontologies
begins with
Find all fields which
begins with
'alpha'
in all ontologies
ends with
Find all fields which
ends with
'hydrogenase'
in all ontologies
use * as wildcard
Use the search mode
use * as wildcard
to find e.g. all fields beginning with two characters (_) followed by phospho, any characters and ends with activity =>
'__phospho*activity'
in all ontologies
regular expression
This search mode is definitely an
expert mode
. If you are not familiar with regular expressions read an introduction at
wikipedia
.
Here a simple example '(reductase|dehydrogenase).*NAD([(]P[)])?'
Use
'AND', 'OR, or 'AND NOT'
as logical links between search terms
Use
'AND', 'OR, or 'AND NOT'
(always in capitals) to restrict or expand your search. For example you can search for cell OR brain AND NOT wall
Search in selected ontologies
You can restrict your search to selected ontologies. Search e.g. fields with
'contains'
liver only in tissues and cellular components
to start the examples
