The 1.7 A crystal structure of the apo form of the soluble quinoprotein glucose dehydrogenase from Acinetobacter calcoaceticus reveals a novel internal conserved sequence repeat

Oubrie, A.; Rozeboom, H.J.; Kalk, K.H.; Duine, J.A.; Dijkstra, B.W.; J. Mol. Biol. 289, 319-333 (1999)

 show all sequences of 1.1.5.2

Data extracted from this reference:

Crystallization (Commentary)
Crystallization Organism
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 25001
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 69 V
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 69-V
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 80-1
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus AC3
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus ADP-96
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus ATCC23055
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus BADO ADP1
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus BD 413
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus BD413
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus EBF
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus EGB
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus F45
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus F46
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus LMD 79.41
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus LMD79.41
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus L.M.D.
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus MdcH
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus N.C.I.B. 8250
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus NCIM 2890
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus NCIMB 9871
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus SW1
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus ULA-501
Organism
Organism Primary Accession No. (UniProt) Commentary Textmining
Acinetobacter calcoaceticus P13650
-
-
Crystallization (Commentary) (protein specific)
Crystallization Organism
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 25001
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 69-V
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 69 V
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus 80-1
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus AC3
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus ADP-96
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus ATCC23055
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus BADO ADP1
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus BD413
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus BD 413
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus EBF
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus EGB
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus F45
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus F46
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus L.M.D.
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus LMD79.41
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus LMD 79.41
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus MdcH
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus N.C.I.B. 8250
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus NCIM 2890
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus NCIMB 9871
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus SW1
apo form of the soluble glucose dehydrogenase Acinetobacter calcoaceticus ULA-501

See also following references to EC number 1.1.5.2 (sorted by year of publication):
No.1st authorPub
Med		titleorganimsjournalvolumepagesyearActivating CompoundApplicationCloned(Commentary)Crystallization (Commentary)EngineeringGeneral StabilityInhibitorsKM Value [mM]LocalizationMetals/IonsMolecular Weight [Da]Natural Substrates/ Products (Substrates)Organic Solvent StabilityOrganismOxidation StabilityPosttranslational ModificationPurification (Commentary)ReactionRenatured (Commentary)Source TissueSpecific Activity [micromol/min/mg]Storage StabilitySubstrates and Products (Substrate)SubunitsTemperature Optimum [°C]Temperature Range [°C]Temperature Stability [°C]Turnover Number [1/s]pH OptimumpH RangepH StabilityCofactorKi Value [mM]pI ValueIC50 ValueActivating Compound (protein specific)Application (protein specific)Cloned(Commentary) (protein specific)Cofactor (protein specific)Crystallization (Commentary) (protein specific)Engineering (protein specific)General Stability (protein specific)IC50 Value (protein specific)Inhibitors (protein specific)Ki Value [mM] (protein specific)KM Value [mM] (protein specific)Localization (protein specific)Metals/Ions (protein specific)Molecular Weight [Da] (protein specific)Natural Substrates/ Products (Substrates) (protein specific)Organic Solvent Stability (protein specific)Oxidation Stability (protein specific)Posttranslational Modification (protein specific)Purification (Commentary) (protein specific)Renatured (Commentary) (protein specific)Source Tissue (protein specific)Specific Activity [micromol/min/mg] (protein specific)Storage Stability (protein specific)Substrates and Products (Substrate) (protein specific)Subunits (protein specific)Temperature Optimum [°C] (protein specific)Temperature Range [°C] (protein specific)Temperature Stability [°C] (protein specific)Turnover Number [1/s] (protein specific)pH Optimum (protein specific)pH Range (protein specific)pH Stability (protein specific)pI Value (protein specific)ExpressionGeneral InformationGeneral Information (protein specific)Expression (protein specific)KCat/KM [mM/s]KCat/KM [mM/s] (protein specific)
713001HoferCharacterization and engineeri ...Sorangium cellulosumMol. Biotechnol.47253-2612011--1-7--8-12--5--1-1---9-111811-1-----11-7----8-12----11---9-111811------88
711018SakurabaCatalytic properties and cryst ...Pyrobaculum aerophilumArch. Biochem. Biophys.50281-882010--11--16--21-4--1---1-1011-151-11-----111---1-6--21---1--1-1011-151-1-----99
712800SashidharHighly conserved Asp-204 and G ...Escherichia coliJ. Mol. Microbiol. Biotechnol.18109-1192010--1-16---1-11-2--1-----2--------1-----11-16-----1-11---1----2---------------
687745MustafaAmino acid residues interactin ...Escherichia coli, Escherichia coli YU423J. Biol. Chem.28322215-222212008--1-5---2----5--1-----2--------1-----11-5-----2------1----2----------11---
701173BuchMetabolic channeling of glucos ...Pseudomonas aeruginosa, Pseudomonas aeruginosa P4, Pseudomonas fluorescensRes. Microbiol.159635-6422008-------------3------3-2---------------------------------3-2---------------
702498MustafaFunction of a bound ubiquinone ...Escherichia coliBiofactors3223-292008----1---3----4-----------------1------1-1-----3----------------------11---
703434Laurinavicius-Behavior of PQQ glucose dehydr ...Erwinia sp.Electroanalysis201391-13952008-4-----------1--4--------------4----4-4--------------4--------------------
706361Bernardelli-Symbiotic phenotype of a membr ...Sinorhizobium melilotiPlant Soil313217-2252008-------------1------------------------------------------------------1111--
685698LauImproved specificity of reagen ...Acinetobacter calcoaceticusBiosens. Bioelectron.223014-30202007--1------1---3--------2---1----1-----11--------1----------2---1-----------
686370Ivnitski-Direct bioelectrocatalysis of ...Acinetobacter sp.Electroanalysis191562-15682007-----1-------1--------1--------1------1--1----------------1---------------
689259IkebukuroConstruction of target molecul ...Acinetobacter calcoaceticusNucleic Acids Symp. Ser.51401-40220072-----1------2---------------------2-------1------------------------------
689260IkebukuroSelection of DNA aptamers that ...Acinetobacter calcoaceticusNucleic Acids Symp. Ser.51403-4042007-1----1--11--2--------11-------1----1-1----1---11---------11--------------
671165Sanchez-WeatherbyCrystallization of quinoprotei ...Acinetobacter calcoaceticus, Escherichia coli, Streptomyces coelicolorActa Crystallogr.Sect.F62518-5212006---263------3-6--3-----3--------3------3263--------3---3----3---------------
671548HamamatsuModified substrate specificity ...Acinetobacter calcoaceticusAppl. Microbiol. Biotechnol.73607-6172006--1-23----111-2--1--1--41----1--1-----11-23------111---1-1--41----1---------
674663SouthallSoluble aldose sugar dehydroge ...Escherichia coliJ. Biol. Chem.28130650-306592006--11---3-111-4--1-----2-1--31--1-----111-----3-111---1----2-1--31---------
655127TanakaIncreasing stability of water- ...Acinetobacter calcoaceticusBMC Biochem.612005-11-3--311-1-3------4-221-1-1--1----111-3----311-1------4-221-1-1---------
654449OkudaPQQ glucose dehydrogenase with ...Acinetobacter calcoaceticus, Acinetobacter calcoaceticus LMD79.41Biochem. Biophys. Res. Commun.314793-7972004-21-24--311-1-6--1-----41---11--1-1--211-24----311-1---1----41---11--1------
654936Lapenaite-Some quinone derivatives as re ...Erwinia sp., Erwinia sp. 34-1Biologia (Bratisl.)120-222004-------1-----2--------7--------1------1------1------------7---------------
654947IgarashiEngineering PQQ glucose dehydr ...Acinetobacter calcoaceticusBiomol. Eng.2181-892004-11-69--2811---2------1-12---1291--1----111-69----2811--------1-12---1291---------
655791ReddyMechanism of glucose oxidation ...Acinetobacter calcoaceticusJ. Am. Chem. Soc.1262431-24382004--------21---2---1----11-------1-1----1-------21----------11-------1------
655929IgarashiConstruction and characterizat ...Acinetobacter calcoaceticusJ. Biochem. Biophys. Methods61331-3382004--1-1--1211---1----24-3-71---21--1-----11-1----1211------24-3-71---21---------
654780IvanovaComparative kinetic study of D ...Erwinia sp.Biochemistry68407-4152003-------1-----3---4--4-1--------5------5------1----------4-1---------------
654863OubrieStructure and mechanism of sol ...Acinetobacter calcoaceticusBiochim. Biophys. Acta1647143-1512003---24----1--1-2---1----21-------1------124------1--1--------21--------------
654864YamadaEscherichia coli PQQ-containin ...Acinetobacter calcoaceticus, Escherichia coliBiochim. Biophys. Acta1647185-1922003--------42-4-4---2----62-------2------2-------42-4--------62--------------
654865JamesThe metal ion in the active si ...Escherichia coliBiochim. Biophys. Acta1647200-2052003----3-4924-1-3---1----10-1-8-1--11-----1-3--41924-1--------10-1-8-1---------
654938Laurinavicius-Comparative characterization o ...Acinetobacter calcoaceticus, Acinetobacter calcoaceticus L.M.D., Erwinia sp., Erwinia sp. 34-1Biologia (Bratisl.)231-342003-5---5-652---4------5-14-----6--2----5-2--5---652--------5-14-----6---------
655097KohSurface charge engineering of ...Acinetobacter calcoaceticusBiotechnol. Lett.251695-17012003-11-1--18-1---1--1-----7-1-1-1--1----111-1----18-1-----1----7-1-1-1---------
655101YoshidaImproved substrate specificity ...Escherichia coliBiotechnol. Lett.25301-3052003--1-1---11---2------1-9-----1--1-----11-1-----11--------1-9-----1---------
656767IgarashiStabilization of quaternary st ...Escherichia coliMol. Biotechnol.2497-1042003--1-1---1----2---------1--1----------1--1-----1------------1--1-----------
654398Sode-Construction of engineered wat ...Escherichia coliBiocatal. Biotransform.20405-4122002-11-12--1811---1---1--1-711--181--1----111-12----1811--------1-711--181---------
655363Yoshida-Secretion of water soluble pyr ...Acinetobacter calcoaceticusEnzyme Microb. Technol.30312-3182002-11---1-3----1-241---1-111--1-1--1----111----1--3-----241--1-111--1-1---------
639206BernardelliPeriplasmic PQQ-dependent gluc ...Rhizobium tropici, Sinorhizobium melilotiCurr. Microbiol.42310-3152001--------3----2-----19-----------3------3-------3--------19------------------
639207EliasC-terminal periplasmic domain ...Escherichia coliJ. Biol. Chem.27648356-483612001-------62--1-3--1---1-3----------------------62--1---1--1-3---------------
639208EliasFunctions of amino acid residu ...Escherichia coliJ. Biol. Chem.2757321-73262000----7--17-----4--------2--------1------1-7----17------------2---------------
639214HeubergerA spectroscopic assay for the ...Acinetobacter calcoaceticusEur. J. Biochem.267228-2342000-1-----31----1--------3--------1----1-1------31-----------3---------------
639215Iswantini-Kinetics and thermodynamics of ...Escherichia coliBiochem. J.350917-9232000--------12---1--------4--------1------1-------12----------4---------------
639218SodeIncreasing the thermal stabili ...Acinetobacter calcoaceticusEnzyme Microb. Technol.26491-4962000-1--7--------1----------------------1---7---------------------------------
639204OubrieThe 1.7 A crystal structure of ...Acinetobacter calcoaceticusJ. Mol. Biol.289319-3331999---24---------1-------------------------24----------------------------------
639205YoshidaEngineering a chimeric pyrrolo ...Acinetobacter calcoaceticus, Escherichia coliProtein Eng.1263-701999----25-1------6------------1-------------25--1------------------1-----------
639212Sode-Construction and characterizat ...Escherichia coliBiotechnol. Lett.21707-7101999----1--2-----1--1-----1---1----1------1-1----2-------1----1---1-----------
639213Cozier-Characterization of the membra ...Escherichia coliBiochem. J.340639-6471999----1--181----1--1-----15--------1------1-1----181------1----15---------------
639216IgarashiConstruction and characterizat ...Acinetobacter calcoaceticusBiochem. Biophys. Res. Commun.264820-8241999----10--27-----1--------10---118------------10----27------------10---118----------
639220OubrieActive-site structure of the s ...Acinetobacter calcoaceticusProc. Natl. Acad. Sci. USA9611787-117911999-------21-1---3------1-11--------1------1------21-1--------1-11---------------
639209OlsthoornOn the mechanism and specifici ...Acinetobacter calcoaceticusBiochemistry3713854-138611998-------------1--------1----11-----------------------------1----11---------
639210YamadaMutant isolation of the Escher ...Escherichia coliJ. Biol. Chem.27322021-220271998--1-8--10-1---3--1-----1--------1-----11-8----10-1-----1----1---------------
639219DewantiReconstitution of membrane.int ...Acinetobacter calcoaceticusBiochemistry376810-68181998---24--1------4--------1--------1------124---1--------------1---------------
639217OlsthoornProduction, characterization, ...Acinetobacter calcoaceticusArch. Biochem. Biophys.33642-481996--1-----11---4--1---1----------1-----11-------11-----1--1-----------------
639211YamadaTopological analysis of quinop ...Escherichia coliJ. Biol. Chem.26812812-128171993--------1--1-4------1-2--------1------1-------1--1------1-2---------------
639192Cleton-JansenCloning, mapping, and sequenci ...Escherichia coliJ. Bacteriol.1726308-63151990--1----------4-----------------1-----11-----------------------------------
639193HommesThe separate roles of PQQ and ...Klebsiella pneumoniaeArch. Microbiol.151257-2601989-----------1-1--------1--------1------1----------1--------1---------------
639196MatsushitaReactivity with ubiquinone of ...Gluconobacter oxydansJ. Biochem.105633-6371989--------1--2-4--1---1-4--------1------1-------1--2---1--1-4---------------
639197MatsushitaQuinoprotein D-glucose dehydro ...Acinetobacter calcoaceticusBiochemistry286276-62801989-------52----3--1---1-22----21-1------1------52------1--1-22----21--------
639198GeigerReversible thermal inactivatio ...Acinetobacter calcoaceticusBiochem. J.261415-4211989---------3---3--------1---2--------------------3----------1---2-----------
639199MatsushitaQuinoprotein D-glucose dehydro ...Acinetobacter calcoaceticus, Acinetobacter calcoaceticus LMD 79.41Antonie Leeuwenhoek5663-721989-------112--1-2--1---2-62----21---------------112--1---1--2-62----21--------
639194Van Schie-PQQ-dependent production of gl ...Acinetobacter lwoffii, Agrobacterium tumefaciens, Azotobacter vinelandii, Rhizobium leguminosarumJ. Gen. Microbiol.133867-8751987---------10---4-----------------7------7--------10--------------------------
639195Dokter-The in vivo and in vitro subst ...Acinetobacter calcoaceticus, Acinetobacter calcoaceticus LMD 79.41, Pseudomonas sp.FEMS Microbiol. Lett.43195-2001987-------7-----3--1-----8----------------------7-------1----8---------------
639190Geiger-Crystalline quinoprotein gluco ...Acinetobacter calcoaceticusBiochemistry256043-60481986---24--22--1--1--11--1-11-------1------124---2-2--1----1--1-11--------------
639191DokterPurification and characterizat ...Acinetobacter calcoaceticus, Acinetobacter calcoaceticus LMD 79.41, Enterobacter aerogenes, Escherichia coli, Gluconobacter oxydans, Pseudomonas sp.Biochem. J.239163-1671986-------2--1--13--11--1-161----2--5------5------2--1----1--1-161----2---------
639200Matsushita-Immunological evidence for two ...Acetobacter aceti, Acinetobacter calcoaceticus, Escherichia coli, Gluconobacter oxydans, Klebsiella pneumoniae, Pseudomonas aeruginosaFEMS Microbiol. Lett.37141-1441986--------8----6-----------------6------6-------8---------------------------
639189DuineDetection and determination of ...Enterobacter aerogenes, Pseudomonas aeruginosaAnal. Biochem.133239-2431983-2-----------4-----------------2----2-2-----------------------------------
639201Matsushita-D-Glucose dehydrogenase from P ...Pseudomonas fluorescensMethods Enzymol.89149-1541982------292-1--1--1---1-111-------1------1----2-92-1----1--1-111--------------
639202Matsushita-Membrane-bound, electron trans ...Pseudomonas fluorescensAgric. Biol. Chem.461007-10111982------132----1--1-----6--------1------1----1-32------1----6---------------
639203Ameyama-L-Glucose dehydrogenase of Glu ...Gluconobacter oxydansAgric. Biol. Chem.45851-8611981----------1--1--1---1-9-----2111------1---------1----1--1-9-----211-------
639188DuineGlucose dehydrogenase from Aci ...Acinetobacter calcoaceticusFEBS Lett.108443-4461979-------------1--1--------------1------1--------------1--------------------