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Literature summary for 4.1.1.39 extracted from

  • McFadden, B.A.; Tabita, F.R.; Kuehn, G.D.
    Ribulose-diphosphate carboxylase from the hydrogen bacteria and Rhodospirillum rubrum (1975), Methods Enzymol., 42C, 461-472.
    View publication on PubMed

Metals/Ions

Metals/Ions Comment Organism Structure
Co2+ activation Cupriavidus necator
Co2+ activation Rhodospirillum rubrum
Co2+ activation Acidovorax facilis

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
56000
-
2 * 56000, SDS-PAGE Rhodospirillum rubrum
114000
-
light scattering Rhodospirillum rubrum
515000
-
sedimentation equilibrium centrifugation Cupriavidus necator
551000
-
sedimentation equilibrium centrifugation Acidovorax facilis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
D-Ribulose 1,5-bisphosphate + CO2 Cupriavidus necator
-
?
-
?
D-Ribulose 1,5-bisphosphate + CO2 Rhodospirillum rubrum
-
?
-
?
D-Ribulose 1,5-bisphosphate + CO2 Acidovorax facilis
-
?
-
?

Organism

Organism UniProt Comment Textmining
Acidovorax facilis
-
-
-
Cupriavidus necator
-
-
-
Rhodospirillum rubrum
-
-
-

Purification (Commentary)

Purification (Comment) Organism
-
Cupriavidus necator
-
Rhodospirillum rubrum
-
Acidovorax facilis

Reaction

Reaction Comment Organism Reaction ID
2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Cupriavidus necator
2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Rhodospirillum rubrum
2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O D-ribulose 1,5-bisphosphate + CO2 = 2 3-phospho-D-glycerate, carboxylase reaction Acidovorax facilis

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
D-Ribulose 1,5-bisphosphate + CO2
-
Cupriavidus necator D-3-Phosphoglycerate
-
?
D-Ribulose 1,5-bisphosphate + CO2
-
Rhodospirillum rubrum D-3-Phosphoglycerate
-
?
D-Ribulose 1,5-bisphosphate + CO2
-
Acidovorax facilis D-3-Phosphoglycerate
-
?
D-Ribulose 1,5-bisphosphate + CO2
-
Cupriavidus necator ?
-
?
D-Ribulose 1,5-bisphosphate + CO2
-
Rhodospirillum rubrum ?
-
?
D-Ribulose 1,5-bisphosphate + CO2
-
Acidovorax facilis ?
-
?

Subunits

Subunits Comment Organism
dimer 2 * 56000, SDS-PAGE Rhodospirillum rubrum

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
1.04
-
CO2
-
Acidovorax facilis
1.38
-
CO2
-
Cupriavidus necator
1.69
-
CO2
-
Rhodospirillum rubrum