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Literature summary for 3.4.17.2 extracted from

  • Adler, M.; Bryant, J.; Buckman, B.; Islam, I.; Larsen, B.; Finster, S.; Kent, L.; May, K.; Mohan, R.; Yuan, S.; Whitlow, M.
    Crystal structures of potent thiol-based inhibitors bound to carboxypeptidase B (2005), Biochemistry, 44, 9339-9347.
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
enzyme in complex with inhibitors DL-2-mercaptomethyl-3-guanidinoethylthiopropanoic acid, 2-(5-carbamimidamido-2-chlorophenyl)-3-sulfanylpropanoic acid, (2R)-2-(3-carbamimidamidophenyl)-3-sulfanylpropanoic acid, or 5-carbamimidamido-2-(sulfanylmethyl)pentanoic acid, hanging drop vapour diffusion method, 0.21 mg/ml protein in 10 mM Tris, pH 7.0, 1 mM inhibitor, and 50 mM NaCl, mixed with an equal volume of 0.002 ml of reservoir solution containing 0.15-0.30 M magnesium acetate, 0.1 M sodium cacodylate, pH 6.5, and 12-22% PEG 8000, X-ray diffraction structure determination and analysis at 1.4-2.0 A resolution Sus scrofa

Inhibitors

Inhibitors Comment Organism Structure
(2R)-2-(3-carbamimidamidophenyl)-3-sulfanylpropanoic acid binding structure analysis Sus scrofa
2-(5-carbamimidamido-2-chlorophenyl)-3-sulfanylpropanoic acid binding structure analysis Sus scrofa
5-carbamimidamido-2-(sulfanylmethyl)pentanoic acid binding structure analysis Sus scrofa
DL-2-mercaptomethyl-3-guanidinoethylthiopropanoic acid binding structure analysis Sus scrofa

Organism

Organism UniProt Comment Textmining
Sus scrofa P09955
-
-

Purification (Commentary)

Purification (Comment) Organism
further purification of the commercial pancreatic preparation by hydrophobic interaction chromatography Sus scrofa

Source Tissue

Source Tissue Comment Organism Textmining
commercial preparation
-
Sus scrofa
-
pancreas
-
Sus scrofa
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
hippuryl-L-arginine + H2O
-
Sus scrofa hippuric acid + L-Arg
-
?

Synonyms

Synonyms Comment Organism
pp-CpB
-
Sus scrofa

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
22
-
assay at room temperature Sus scrofa

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.4
-
assay at Sus scrofa

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
0.000002
-
(2R)-2-(3-carbamimidamidophenyl)-3-sulfanylpropanoic acid pH 7.4, 22°C Sus scrofa
0.000002
-
5-carbamimidamido-2-(sulfanylmethyl)pentanoic acid pH 7.4, 22°C Sus scrofa
0.000007
-
2-(5-carbamimidamido-2-chlorophenyl)-3-sulfanylpropanoic acid pH 7.4, 22°C Sus scrofa
0.000063
-
DL-2-mercaptomethyl-3-guanidinoethylthiopropanoic acid pH 7.4, 22°C Sus scrofa