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Literature summary for 3.1.21.5 extracted from

  • Rao, D.N.; Dryden, D.T.; Bheemanaik, S.
    Type III restriction-modification enzymes: a historical perspective (2014), Nucleic Acids Res., 42, 45-55.
    View publication on PubMedView publication on EuropePMC

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required Salmonella enterica subsp. enterica serovar Typhimurium
Mg2+ required Haemophilus influenzae
Mg2+ required Escherichia coli
Mg2+ required Lactococcus lactis
Mg2+ required Bacillus cereus
Mg2+ required Mannheimia haemolytica
Mg2+ required Providencia stuartii

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
DNA + H2O Lactococcus lactis
-
specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Bacillus cereus
-
specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Mannheimia haemolytica
-
specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Salmonella enterica subsp. enterica serovar Typhimurium the recognition sequence is 5'-CAGAG-3' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Providencia stuartii the recognition sequence is 5'-CATCAG-3' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Neisseria gonorrhoeae the recognition sequence is 5'-CCACC-3' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Haemophilus influenzae the recognition sequence is 5'-CGAAT-3' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Helicobacter pylori the recognition sequence is 5'-GCAG-3' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Escherichia coli the recognition sequences of EcoP15I and EcoPI are 5'-CAGCAG-3' and 5'-AGACC-3' , respectively' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O Escherichia coli 15T- the recognition sequences of EcoP15I and EcoPI are 5'-CAGCAG-3' and 5'-AGACC-3' , respectively' specific double-stranded DNA fragments with terminal 5'-phosphate
-
?

Organism

Organism UniProt Comment Textmining
Bacillus cereus
-
-
-
Escherichia coli
-
-
-
Escherichia coli 15T-
-
-
-
Haemophilus influenzae
-
-
-
Helicobacter pylori
-
-
-
Lactococcus lactis
-
-
-
Mannheimia haemolytica
-
-
-
Neisseria gonorrhoeae
-
-
-
Providencia stuartii
-
-
-
Salmonella enterica subsp. enterica serovar Typhimurium
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
DNA + H2O
-
Lactococcus lactis specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O
-
Bacillus cereus specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O
-
Mannheimia haemolytica specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequence is 5'-CAGAG-3' Salmonella enterica subsp. enterica serovar Typhimurium specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequence is 5'-CATCAG-3' Providencia stuartii specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequence is 5'-CCACC-3' Neisseria gonorrhoeae specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequence is 5'-CGAAT-3' Haemophilus influenzae specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequence is 5'-GCAG-3' Helicobacter pylori specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequences of EcoP15I and EcoPI are 5'-CAGCAG-3' and 5'-AGACC-3' , respectively' Escherichia coli specific double-stranded DNA fragments with terminal 5'-phosphate
-
?
DNA + H2O the recognition sequences of EcoP15I and EcoPI are 5'-CAGCAG-3' and 5'-AGACC-3' , respectively' Escherichia coli 15T- specific double-stranded DNA fragments with terminal 5'-phosphate
-
?

Synonyms

Synonyms Comment Organism
BceSI
-
Bacillus cereus
EcoP1
-
Escherichia coli
EcoP15
-
Escherichia coli
HinFIII
-
Haemophilus influenzae
LlaFI
-
Lactococcus lactis
NgoAXP
-
Neisseria gonorrhoeae
PhaBI
-
Mannheimia haemolytica
PstII
-
Providencia stuartii
StyLTI
-
Salmonella enterica subsp. enterica serovar Typhimurium
type III R-M enzyme
-
Salmonella enterica subsp. enterica serovar Typhimurium
type III R-M enzyme
-
Haemophilus influenzae
type III R-M enzyme
-
Escherichia coli
type III R-M enzyme
-
Lactococcus lactis
type III R-M enzyme
-
Neisseria gonorrhoeae
type III R-M enzyme
-
Bacillus cereus
type III R-M enzyme
-
Helicobacter pylori
type III R-M enzyme
-
Mannheimia haemolytica
type III R-M enzyme
-
Providencia stuartii
type III restriction-modification enzyme
-
Salmonella enterica subsp. enterica serovar Typhimurium
type III restriction-modification enzyme
-
Haemophilus influenzae
type III restriction-modification enzyme
-
Escherichia coli
type III restriction-modification enzyme
-
Lactococcus lactis
type III restriction-modification enzyme
-
Neisseria gonorrhoeae
type III restriction-modification enzyme
-
Bacillus cereus
type III restriction-modification enzyme
-
Helicobacter pylori
type III restriction-modification enzyme
-
Mannheimia haemolytica
type III restriction-modification enzyme
-
Providencia stuartii

Cofactor

Cofactor Comment Organism Structure
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Salmonella enterica subsp. enterica serovar Typhimurium
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Haemophilus influenzae
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Escherichia coli
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Lactococcus lactis
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Bacillus cereus
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Mannheimia haemolytica
ATP type III R-M enzymes possess a sequence-specific ATPase activity for DNA cleavage. ATP hydrolysis is required for the long-distance communication between the sites before cleavage Providencia stuartii
CTP
-
Providencia stuartii
GTP
-
Providencia stuartii
S-adenosyl-L-methionine
-
Salmonella enterica subsp. enterica serovar Typhimurium