Application | Comment | Organism |
---|---|---|
diagnostics | evaluation of rpo genes as phylogenetic markers on the example of the genus Lamium, Lamiaceae. The most promising phylogenetic marker is the rpoA gene, while the least useful gene appears to be rpoC1 | Lamium |
Cloned (Comment) | Organism |
---|---|
genes rpoA, rpoB, rpoC1, and rpoC2 encoding the enzyme subunits, DNA and amino acid sequence determination and analysis, phylogenetic analysis, number of sites containing synonymous and nonsynonymous substitutions, overview | Lamium |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
chloroplast | - |
Lamium | 9507 | - |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Lamium | - |
genes rpoA, rpoB, rpoC1, and rpoC2 encoding the enzyme subunits | - |
Synonyms | Comment | Organism |
---|---|---|
DNA-dependent RNA polymerase I | - |
Lamium |
plastid-encoded polymerase | - |
Lamium |
General Information | Comment | Organism |
---|---|---|
evolution | the rpo genes that encode the enzyme subunits, rpoA, rpoB, rpoC1, and rpoC2, are relatively rapidly evolving sequences. Determination of the rate of the molecular evolution of rpo genes and to evaluation as phylogenetic markers on the example of the genus Lamium, Lamiaceae, represented by 66 specimens. Distribution of substitution rates across rpo genes as calculated in HyPhy using the GTR model of evolution, overview. The process of evolution of the RNA polymerase type I enzyme in genus Lamium is due not only to the genetic drift | Lamium |
physiological function | RNA polymerase type I (plastid-encoded polymerase, PEP) is one of the key chloroplast enzymes | Lamium |