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Literature summary for 2.7.7.6 extracted from

  • Chen, H.; Contreras, X.; Yamaguchi, Y.; Handa, H.; Peterlin, B.M.; Guo, S.
    Repression of RNA polymerase II elongation in vivo is critically dependent on the C-terminus of Spt5 (2009), PLoS ONE, 4, e6918.
    View publication on PubMedView publication on EuropePMC

Activating Compound

Activating Compound Comment Organism Structure
Spt5 the large subunit of the DRB sensitivity-inducing factor, DSIF, represses or activates RNAPII elongation in vitro. CTR1 and CTR2CT, the two repeat-containing regions constituting the C-terminus of Spt5, play a redundant role in repressing RNAPII elongation in vivo, overview. Mutant NSpt5, lacking the C-terminus, directly associates with hsp70-4 chromatin in vivo and increases the occupancy of RNAPII, positive transcription elongation factor b, histone H3 Lys 4 trimethylation, and surprisingly, the negative elongation factor A at the locus, indicating a direct action of NSpt5 on the elongation repressed locus, nuclear extracts containing the constitutively active P-TEFb and WT DSIF lead to a time-dependent increase of the long, promoter-distal RNase T1-resistant products, reflecting the elongation stimulatory activity of Spt5, overview Danio rerio

Inhibitors

Inhibitors Comment Organism Structure
Spt5 the large subunit of the DRB sensitivity-inducing factor, DSIF, represses or activates RNAPII elongation in vitro. CTR1 and CTR2CT, the two repeat-containing regions constituting the C-terminus of Spt5, play a redundant role in repressing RNAPII elongation in vivo, overview. Mutant NSpt5, lacking the C-terminus, directly associates with hsp70-4 chromatin in vivo and increases the occupancy of RNAPII, positive transcription elongation factor b, histone H3 Lys 4 trimethylation, and surprisingly, the negative elongation factor A at the locus, indicating a direct action of NSpt5 on the elongation repressed locus, nuclear extracts containing the constitutively active P-TEFb and WT DSIF lead to a time-dependent increase of the long, promoter-distal RNase T1-resistant products, reflecting the elongation stimulatory activity of Spt5, overview Danio rerio

Localization

Localization Comment Organism GeneOntology No. Textmining
nucleus
-
Danio rerio 5634
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
nucleoside triphosphate + RNAn Danio rerio transcription elongation as a critical regulatory step in addition to initiation diphosphate + RNAn+1
-
?

Organism

Organism UniProt Comment Textmining
Danio rerio
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
nucleoside triphosphate + RNAn
-
Danio rerio diphosphate + RNAn+1
-
?
nucleoside triphosphate + RNAn transcription elongation as a critical regulatory step in addition to initiation Danio rerio diphosphate + RNAn+1
-
?

Synonyms

Synonyms Comment Organism
RNA polymerase II
-
Danio rerio
RNAPII
-
Danio rerio