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Literature summary for 2.2.1.5 extracted from

  • Balakrishnan, A.; Jordan, F.; Nathan, C.F.
    Influence of allosteric regulators on individual steps in the reaction catalyzed by Mycobacterium tuberculosis 2-hydroxy-3-oxoadipate synthase (2013), J. Biol. Chem., 288, 21688-21702.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
expressed in Escherichia coli BL21(DE3) CodonPlus-RILP cells Mycobacterium tuberculosis

Inhibitors

Inhibitors Comment Organism Structure
GarA protein non-competitive inhibition Mycobacterium tuberculosis
glyoxylate
-
Mycobacterium tuberculosis

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.84
-
2-oxoglutarate at pH 6.5 and 37°C Mycobacterium tuberculosis
3.2
-
glyoxylate at pH 6.5 and 37°C Mycobacterium tuberculosis

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ required Mycobacterium tuberculosis

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
2-oxoglutarate + glyoxylate Mycobacterium tuberculosis
-
2-hydroxy-3-oxoadipate + CO2
-
?
2-oxoglutarate + glyoxylate Mycobacterium tuberculosis H37Rv
-
2-hydroxy-3-oxoadipate + CO2
-
?

Organism

Organism UniProt Comment Textmining
Mycobacterium tuberculosis
-
-
-
Mycobacterium tuberculosis H37Rv
-
-
-

Purification (Commentary)

Purification (Comment) Organism
ammonium sulfate precipitation, Q Sepharose column chromatography, Mono Q column chromatography, and Sephacryl S-100 gel filtration Mycobacterium tuberculosis

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2-oxoglutarate + glyoxylate
-
Mycobacterium tuberculosis 2-hydroxy-3-oxoadipate + CO2
-
?
2-oxoglutarate + glyoxylate
-
Mycobacterium tuberculosis H37Rv 2-hydroxy-3-oxoadipate + CO2
-
?

Synonyms

Synonyms Comment Organism
(R)-HOA synthase
-
Mycobacterium tuberculosis
HOA synthase
-
Mycobacterium tuberculosis
HOAS
-
Mycobacterium tuberculosis

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
4.25
-
2-oxoglutarate at pH 6.5 and 37°C Mycobacterium tuberculosis
5.29
-
glyoxylate at pH 6.5 and 37°C Mycobacterium tuberculosis

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
6.5
-
-
Mycobacterium tuberculosis

Cofactor

Cofactor Comment Organism Structure
thiamine diphosphate
-
Mycobacterium tuberculosis

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
1.36
-
GarA protein at pH 6.5 and 37°C Mycobacterium tuberculosis
53.1
-
glyoxylate at pH 6.5 and 37°C Mycobacterium tuberculosis

kcat/KM [mM/s]

kcat/KM Value [1/mMs-1] kcat/KM Value Maximum [1/mMs-1] Substrate Comment Organism Structure
1653
-
glyoxylate at pH 6.5 and 37°C Mycobacterium tuberculosis
5060
-
2-oxoglutarate at pH 6.5 and 37°C Mycobacterium tuberculosis