Activating Compound | Comment | Organism | Structure |
---|---|---|---|
alpha-ketoglutarate | 20% activation | Methylorubrum extorquens | |
ATP | 32% activation | Methylorubrum extorquens | |
citrate | 30% activation | Methylorubrum extorquens | |
isocitrate | 25% activation, stimulates NADP+ regeneration | Methylorubrum extorquens |
Inhibitors | Comment | Organism | Structure |
---|---|---|---|
acetoacetyl-CoA | - |
Azotobacter vinelandii | |
acetoacetyl-CoA | - |
Cupriavidus necator | |
acetoacetyl-CoA | concentration above 40 mM | Methylorubrum extorquens | |
acetoacetyl-CoA | - |
Methylorubrum rhodesianum | |
acetoacetyl-CoA | - |
Zoogloea ramigera | |
NAD+ | 17% inhibition | Methylorubrum extorquens | |
NAD+ | - |
Methylorubrum rhodesianum | |
NADP+ | 40% inhibition | Methylorubrum extorquens | |
NADP+ | - |
Methylorubrum rhodesianum | |
NADPH | - |
Azotobacter vinelandii | |
NADPH | concentrationgreater 100 mM | Methylorubrum extorquens | |
NADPH | - |
Methylorubrum rhodesianum |
KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.005 | - |
acetoacetyl-CoA | - |
Cupriavidus necator | |
0.011 | - |
acetoacetyl-CoA | 100 mM NADPH | Azotobacter vinelandii | |
0.0116 | - |
acetoacetyl-CoA | - |
Methylorubrum extorquens | |
0.015 | - |
acetoacetyl-CoA | - |
Methylorubrum rhodesianum | |
0.018 | - |
NADPH | - |
Methylorubrum rhodesianum | |
0.019 | - |
NADPH | - |
Cupriavidus necator | |
0.02 | - |
NADPH | 32 mM acetoacetyl-CoA | Azotobacter vinelandii | |
0.03 | - |
D-beta-hydroxybutyryl-CoA | - |
Methylorubrum rhodesianum | |
0.031 | - |
NADP+ | - |
Cupriavidus necator | |
0.033 | - |
D-hydroxybutyryl-CoA | - |
Cupriavidus necator | |
0.041 | - |
NADPH | - |
Methylorubrum extorquens | |
0.06 | - |
NADP+ | - |
Methylorubrum rhodesianum | |
0.25 | - |
NAD+ | - |
Cupriavidus necator | |
0.4 | - |
NADH | - |
Cupriavidus necator |
Localization | Comment | Organism | GeneOntology No. | Textmining |
---|---|---|---|---|
soluble | - |
Zoogloea ramigera | - |
- |
soluble | - |
Methylorubrum extorquens | - |
- |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
31000 | - |
4 * 31000, 12% PAGE | Methylorubrum extorquens |
77000 | - |
- |
Azotobacter vinelandii |
84000 | - |
- |
Cupriavidus necator |
92000 | - |
- |
Zoogloea ramigera |
140000 | - |
gel-filtration | Methylorubrum extorquens |
141000 | - |
gradient PAGE | Methylorubrum extorquens |
250000 | - |
- |
Methylorubrum rhodesianum |
Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
---|---|---|---|---|---|---|
acetoacetyl-CoA + NADH + H+ | Zoogloea ramigera | - |
L-3-hydroxybutyryl-CoA + NAD+ | - |
? | |
acetoacetyl-CoA + NADH + H+ | Rhodospirillum rubrum | - |
L-3-hydroxybutyryl-CoA + NAD+ | - |
? | |
acetoacetyl-CoA + NADPH + H+ | Zoogloea ramigera | PHB synthesis | D-3-hydroxybutyryl-CoA + NADP+ | - |
r | |
acetoacetyl-CoA + NADPH + H+ | Cupriavidus necator | PHB synthesis | D-3-hydroxybutyryl-CoA + NADP+ | - |
? | |
acetoacetyl-CoA + NADPH + H+ | Methylorubrum extorquens | tricarboxylic acid cycle, poly-3-hydroxybutyrate synthesis, aerobic serine pathway | D-3-hydroxybutyryl-CoA + NADP+ | - |
r | |
acetoacetyl-CoA + NADPH + H+ | Methylorubrum extorquens 15 | tricarboxylic acid cycle, poly-3-hydroxybutyrate synthesis, aerobic serine pathway | D-3-hydroxybutyryl-CoA + NADP+ | - |
r |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Azotobacter vinelandii | - |
- |
- |
Cupriavidus necator | - |
- |
- |
Methylorubrum extorquens | - |
15 | - |
Methylorubrum extorquens 15 | - |
15 | - |
Methylorubrum rhodesianum | - |
MB 126 | - |
Methylorubrum rhodesianum MB 126 | - |
MB 126 | - |
Rhodospirillum rubrum | - |
- |
- |
Zoogloea ramigera | - |
- |
- |
Purification (Comment) | Organism |
---|---|
PEG, DEAE-Toyopearl column | Methylorubrum extorquens |
Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
---|---|---|---|
184 | - |
- |
Methylorubrum extorquens |
Storage Stability | Organism |
---|---|
0°C, 25 mM Tris-HCl, pH 8.0 | Methylorubrum extorquens |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
acetoacetyl-CoA + NADH + H+ | - |
Zoogloea ramigera | L-3-hydroxybutyryl-CoA + NAD+ | - |
? | |
acetoacetyl-CoA + NADH + H+ | - |
Cupriavidus necator | L-3-hydroxybutyryl-CoA + NAD+ | - |
? | |
acetoacetyl-CoA + NADH + H+ | - |
Rhodospirillum rubrum | L-3-hydroxybutyryl-CoA + NAD+ | - |
? | |
acetoacetyl-CoA + NADPH + H+ | - |
Methylorubrum rhodesianum | D-beta-hydroxybutyryl-CoA + NADP+ | - |
? | |
acetoacetyl-CoA + NADPH + H+ | - |
Methylorubrum rhodesianum MB 126 | D-beta-hydroxybutyryl-CoA + NADP+ | - |
? | |
acetoacetyl-CoA + NADPH + H+ | PHB synthesis | Zoogloea ramigera | D-3-hydroxybutyryl-CoA + NADP+ | - |
r | |
acetoacetyl-CoA + NADPH + H+ | PHB synthesis | Cupriavidus necator | D-3-hydroxybutyryl-CoA + NADP+ | - |
? | |
acetoacetyl-CoA + NADPH + H+ | tricarboxylic acid cycle, poly-3-hydroxybutyrate synthesis, aerobic serine pathway | Methylorubrum extorquens | D-3-hydroxybutyryl-CoA + NADP+ | - |
r | |
acetoacetyl-CoA + NADPH + H+ | tricarboxylic acid cycle, poly-3-hydroxybutyrate synthesis, aerobic serine pathway | Methylorubrum extorquens 15 | D-3-hydroxybutyryl-CoA + NADP+ | - |
r | |
acetoacetyl-CoA + NADPH + H+ | - |
Azotobacter vinelandii | (R)-3-hydroxybutanoyl-CoA +NADP+ | - |
r |
Subunits | Comment | Organism |
---|---|---|
tetramer | - |
Zoogloea ramigera |
tetramer | 4 * 31000, 12% PAGE | Methylorubrum extorquens |
Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
---|---|---|---|
30 | - |
- |
Zoogloea ramigera |
30 | - |
- |
Methylorubrum extorquens |
pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
---|---|---|---|
7.5 | - |
- |
Methylorubrum extorquens |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
NADPH | - |
Azotobacter vinelandii | |
NADPH | - |
Cupriavidus necator | |
NADPH | - |
Methylorubrum rhodesianum | |
NADPH | absolute specificity | Zoogloea ramigera | |
NADPH | absolute specificity | Methylorubrum extorquens |