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Information on EC 5.1.3.5 - UDP-arabinose 4-epimerase and Organism(s) Arabidopsis thaliana

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EC Tree
     5 Isomerases
         5.1 Racemases and epimerases
             5.1.3 Acting on carbohydrates and derivatives
                5.1.3.5 UDP-arabinose 4-epimerase
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This record set is specific for:
Arabidopsis thaliana
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Word Map
The taxonomic range for the selected organisms is: Arabidopsis thaliana
The expected taxonomic range for this enzyme is: Eukaryota, Bacteria
Synonyms
udp-d-xylose 4-epimerase, udp-l-arabinose 4-epimerase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Epimerase, uridine diphosphoarabinose
-
-
-
-
UDP arabinose epimerase
-
-
-
-
UDP xylose-4-epimerase 1
-
UDP-arabinose 4-epimerase
-
-
-
-
UDP-D-xylose 4-epimerase
-
-
-
-
Uridine 5'-diphosphate-D-xylose 4-epimerase
-
-
-
-
Uridine diphosphoarabinose epimerase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
epimerization
PATHWAY SOURCE
PATHWAYS
-
-
SYSTEMATIC NAME
IUBMB Comments
UDP-L-arabinose 4-epimerase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9024-18-4
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
UDP-D-xylose
UDP-L-arabinose
show the reaction diagram
-
-
-
r
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
UDP-D-xylose
UDP-L-arabinose
show the reaction diagram
-
-
-
r
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.16 - 0.43
UDP-D-xylose
TURNOVER NUMBER [1/s]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.2 - 19
UDP-D-xylose
kcat/KM VALUE [1/mMs-1]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.5 - 45
UDP-D-xylose
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
bifunctional cytosolic UDP-glucose 4-epimerase catalyses the interconversion between UDP-D-xylose and UDP-L-arabinose in plants
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
ARAE1_ARATH
419
0
46311
Swiss-Prot
Mitochondrion (Reliability: 5)
ARAE2_ARATH
417
0
45955
Swiss-Prot
Mitochondrion (Reliability: 5)
ARAE3_ARATH
411
0
45155
Swiss-Prot
Mitochondrion (Reliability: 4)
ARAE4_ARATH
436
1
48345
Swiss-Prot
Mitochondrion (Reliability: 3)
UGE1_ARATH
351
0
39158
Swiss-Prot
other Location (Reliability: 3)
UGE3_ARATH
351
0
38910
Swiss-Prot
other Location (Reliability: 4)
UGE4_ARATH
348
0
38123
Swiss-Prot
other Location (Reliability: 2)
UGE5_ARATH
351
0
38618
Swiss-Prot
-
UGE2_ARATH
350
0
38382
Swiss-Prot
-
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
purification of the recombinant Arabidopsis enzyme by Ni-NTA affinity chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Agrobacterium tumefaciens
recombinant protein AtUGE1-5 is expressed in Escherichia coli with C-terminal His-tag
recombinant protein is expressed in Escherichia coli with C-terminal His-tag
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Hamann, T.; Bennett, M.; Mansfield, J.; Somerville, C.
Identification of cell-wall stress as a hexose-dependent and osmosensitive regulator of plant responses
Plant J.
57
1015-1026
2009
Arabidopsis thaliana
Manually annotated by BRENDA team
Siddique, S.; Endres, S.; Atkins, J.M.; Szakasits, D.; Wieczorek, K.; Hofmann, J.; Blaukopf, C.; Urwin, P.E.; Tenhaken, R.; Grundler, F.M.; Kreil, D.P.; Bohlmann, H.
Myo-inositol oxygenase genes are involved in the development of syncytia induced by Heterodera schachtii in Arabidopsis roots
New Phytol.
184
457-472
2009
Arabidopsis thaliana (O64749), Arabidopsis thaliana (Q9FI17), Arabidopsis thaliana (Q9SA77), Arabidopsis thaliana (Q9SUN3)
Manually annotated by BRENDA team
Kotake, T.; Takata, R.; Verma, R.; Takaba, M.; Yamaguchi, D.; Orita, T.; Kaneko, S.; Matsuoka, K.; Koyama, T.; Reiter, W.D.; Tsumuraya, Y.
Bifunctional cytosolic UDP-glucose 4-epimerases catalyse the interconversion between UDP-D-xylose and UDP-L-arabinose in plants
Biochem. J.
424
169-177
2009
Arabidopsis thaliana (Q42605), Arabidopsis thaliana (Q8LDN8), Arabidopsis thaliana (Q9C7W7), Arabidopsis thaliana (Q9SN58), Arabidopsis thaliana (Q9T0A7), Pisum sativum (B0M3E8)
Manually annotated by BRENDA team