Reference on EC 5.1.3.1 - ribulose-phosphate 3-epimerase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Davis, L.; Lee, N.; Glaser, L.
On the mechanism of the pentose phosphate epimerase
J. Biol. Chem.
247
5862-5866
1972
Saccharomyces cerevisiae
Sasajima, K.; Yoneda, M.
D-Sedoheptulose-7-phosphate: D-glyceraldehyde-3-phosphate glycolaldehydetransferase and D-ribulose-5-phosphate 3-epimerase mutants of a Bacillus species
Agric. Biol. Chem.
38
1305-1310
1974
Bacillus sp. (in: Bacteria)
-
Wood, T.
Spectrophotometric assay for D-ribose-5-phosphate ketol-isomerase and for D-ribulose-5-phosphate 3-epimerase
Anal. Biochem.
33
297-306
1970
Bos taurus, Oryctolagus cuniculus, Pigeon, Rattus norvegicus
Williamson, W.T.; Wood, W.A.
D-Ribulose 5-phosphate 3-epimerase
Methods Enzymol.
9
605-608
1966
Saccharomyces cerevisiae
-
Wood, T.
Purification and properties of D-ribulose-5-phosphate 3-epimerase from calf liver
Biochim. Biophys. Acta
570
352-362
1979
Bos taurus
Karmali, A.; Drake, A.F.; Spencer, N.
Purification, properties and assay of D-ribulose 5-phosphate 3-epimerase from human erythrocytes
Biochem. J.
211
617-623
1983
Homo sapiens
Sasajima, K.; Yoneda, M.
Simple procedures for the preparation of D-ribose-5-phosphate ketol-isomerase, D-ribulose-5-phosphate 3-epimerase and D-sedoheptulose-7-phosphate: D-glyceraldehyde-3-phosphate glycolaldehydetransferase
Agric. Biol. Chem.
38
1297-1303
1974
Saccharomyces cerevisiae
-
Casazza, J.P.; Veech, R.L.
The measurement of xylulose 5-phosphate, ribulose 5-phosphate, and combined sedoheptulose 7-phosphate and ribose 5-phosphate in liver tissue
Anal. Biochem.
159
243-248
1986
Rattus norvegicus
Miyazaki, K.; Yamanaka, T.; Ogasawara, N.
Interstitial deletion 2q32.1-->q34 in a child with half normal activity of ribulose 5-phosphate 3-epimerase (RPE)
J. Med. Genet.
25
850-851
1988
Homo sapiens
Dallapiccola, B.; Novelli, G.; Giannotti, A.
Deletion 2q31.3-->2q33.3: gene dosage effect of ribulose 5-phosphate 3-epimerase
Hum. Genet.
79
92
1988
Homo sapiens
Bär, J.; Naumann, M.; Reuter, R.; Kopperschläger, G.
Improved purification of ribulose 5-phosphate 3-epimerase from Saccharomyces cerevisiae and characterization of the enzyme
Bioseparation
6
233-241
1996
Saccharomyces cerevisiae
Nowitzki, U.; Wyrich, R.; Westhoff, P.; Henze, K.; Scharrenberger, C.; Martin, W.
Cloning of the amphibolic Calvin cycle/OPPP enzyme D-ribulose-5-phosphate 3-epimerase (EC 5.1.3.1) from spinach chloroplasts: functional and evolutionary aspects
Plant Mol. Biol.
29
1279-1291
1995
Spinacia oleracea
Miosga, T.; Zimmermann, F.K.
Cloning and characterization of the first two genes of the non-oxidative part of the Saccharomyces cerevisiae pentose-phosphate pathway
Curr. Genet.
30
404-409
1996
Saccharomyces cerevisiae
Teige, M.; Melzer, M.; Suss, K.H.
Purification, properties and in situ localization of the amphibolic enzymes D-ribulose 5-phosphate 3-epimerase and transketolase from spinach chloroplasts
Eur. J. Biochem.
252
237-244
1989
Spinacia oleracea
Thom, E.; Möhlmann, T.; Quick, W.P.; Camara, B.; Neuhaus, H.E.
Sweet pepper plastids: enzymic equipment, characterisation of the plastidic oxidative pentose-phosphate pathway, and transport of phosphorylated intermediates across the envelope membrane
Planta
204
226-233
1998
Capsicum annuum
-
Juhnke, H.; Krems, B.; Kotter, P.; Entian, K.D.
Mutants that show increased sensitivity to hydrogen peroxide reveal an important role for the pentose phosphate pathway in protection of yeast oxidative stress
Mol. Gen. Genet.
252
456-464
1996
Saccharomyces cerevisiae
Lyngstadaas, A.; Lobner-Olesen, A.; Boye, E.
Characterization of three genes in the dam-containing operon of Escherichia coli
Mol. Gen. Genet.
247
546-554
1995
Escherichia coli
Kusian, B.; Yoo, J.G.; Bednarski, R.; Bowien, B.
The Calvin cycle enzyme pentose-5-phosphate 3-epimerase is encoded within the cfx operons of the chemoautotroph Alcaligenes eutrophus
J. Bacteriol.
174
7337-7344
1992
Cupriavidus necator
Kiely, M.E.; Stuart, A.L.; Wood, T.
Partial purification and kinetic properties of ribose-5-phosphate ketol-isomerase and ribulose-5-phosphate 3-epimerase from various sources
Biochim. Biophys. Acta
293
534-541
1973
Bos taurus, Saccharomyces cerevisiae
Chen, Y.R.; Larimer, F.W.; Serpersu, E.H.; Hartman, F.C.
Identification of a catalytic aspartyl residue of D-ribulose 5-phosphate 3-epimerase by site-directed mutagenesis
J. Biol. Chem.
274
2132-2136
1999
Spinacia oleracea (Q43157), Spinacia oleracea
Kopriva, S.; Koprivova, A.; Suss, K.H.
Identification, cloning, and properties of cytosolic D-ribulose-5-phosphate 3-epimerase from higher plants
J. Biol. Chem.
275
1294-1299
2000
Oryza sativa (Q9SE42), Oryza sativa
Kopp, J.; Kopriva, S.; Suss, K.H.; Schulz, G.E.
Structure and mechanism of the amphibolic enzyme D-ribulose-5-phosphate 3-epimerase from potato chloroplasts
J. Mol. Biol.
287
761-771
1999
Solanum tuberosum
Jelakovic, S.; Kopriva, S.; Suss, K.H.; Schulz, G.E.
Structure and catalytic mechanism of the cytosolic D-ribulose-5-phosphate 3-epimerase from rice
J. Mol. Biol.
326
127-135
2003
Oryza sativa (Q9SE42), Oryza sativa
Chen, Y.R.; Hartman, F.C.; Lu, T.Y.; Larimer, F.W.
D-Ribulose-5-phosphate 3-epimerase: cloning and heterologous expression of the spinach gene, and purification and characterization of the recombinant enzyme
Plant Physiol.
118
199-207
1998
Spinacia oleracea (Q43157), Spinacia oleracea
Wise, E.L.; Akana, J.; Gerlt, J.A.; Rayment, I.
Structure of D-ribulose 5-phosphate 3-epimerase from Synechocystis to 1.6 A resolution
Acta Crystallogr. Sect. D
60
1687-1690
2004
Synechocystis sp.
Kuyper, M.; Hartog, M.M.P.; Toirkens, M.J.; Almering, M.J.H.; Winkler, A.A.; van Dijken, J.P.; Pronk, J.T.
Metabolic engineering of a xylose-isomerase-expressing Saccharomyces cerevisiae strain for rapid anaerobic xylose fermentation
FEMS Yeast Res.
5
399-409
2005
Saccharomyces cerevisiae
Bhattacharya, S.; Schiavone, M.; Gomes, J.; Bhattacharya, S.K.
Cascade of bioreactors in series for conversion of 3-phospho-D-glycerate into D-ribulose 1,5-bisphosphate: kinetic parameters of enzymes and operation variables
J. Biotechnol.
111
203-217
2004
Oryza sativa
Karhumaa, K.; Hahn-Haegerdal, B.; Gorwa-Grauslund, M.F.
Investigation of limiting metabolic steps in the utilization of xylose by recombinant Saccharomyces cerevisiae using metabolic engineering
Yeast
22
359-368
2005
Saccharomyces cerevisiae
Akana, J.; Fedorov, A.A.; Fedorov, E.; Novak, W.R.; Babbitt, P.C.; Almo, S.C.; Gerlt, J.A.
D-Ribulose 5-phosphate 3-epimerase: functional and structural relationships to members of the ribulose-phosphate binding (beta/alpha)8-barrel superfamily
Biochemistry
45
2493-2503
2006
Streptococcus pyogenes (Q9A1H8), Streptococcus pyogenes
Anderson, L.E.; Chrostowski, J.; Carol, A.A.
Enzyme co-localization with transketolase, xylulose-5-P 3-epimerase and phosphoriboisomerase in pea leaf chloroplasts
Plant Sci.
171
686-698
2006
Pisum sativum
Jansen, T.; Kurian, D.; Raksajit, W.; York, S.; Summers, M.; Mäenpää, P.
Characterization of trophic changes and a functional oxidative pentose phosphate pathway in Synechocystis sp. PCC 6803
Acta Physiol. Plant.
32
511-518
2010
Synechocystis sp.
-
Liang, W.; Ouyang, S.; Shaw, N.; Joachimiak, A.; Zhang, R.; Liu, Z.J.
Conversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate: new insights from structural and biochemical studies on human RPE
FASEB J.
25
497-504
2011
Homo sapiens (Q96AT9), Homo sapiens
Sobota, J.M.; Imlay, J.A.
Iron enzyme ribulose-5-phosphate 3-epimerase in Escherichia coli is rapidly damaged by hydrogen peroxide but can be protected by manganese
Proc. Natl. Acad. Sci. USA
108
5402-5407
2011
Escherichia coli
Bourand, A.; Yebra, M.J.; Boel, G.; Maze, A.; Deutscher, J.
Utilization of D-ribitol by Lactobacillus casei BL23 requires a mannose-type phosphotransferase system and three catabolic enzymes
J. Bacteriol.
195
2652-2661
2013
Lacticaseibacillus casei, Lacticaseibacillus casei (A0A510WIR9), Lacticaseibacillus casei 64H
Terada, T.; Mukae, H.; Ohashi, K.; Hosomi, S.; Mizoguchi, T.; Uehara, K.
Characterization of an enzyme which catalyzes isomerization and epimerization of D-erythrose 4-phosphate
Eur. J. Biochem.
148
345-351
1985
Bos taurus
Le, S.B.; Heggeset, T.M.B.; Haugen, T.; Naerdal, I.; Brautaset, T.
6-Phosphofructokinase and ribulose-5-phosphate 3-epimerase in methylotrophic Bacillus methanolicus ribulose monophosphate cycle
Appl. Microbiol. Biotechnol.
101
4185-4200
2017
Bacillus methanolicus (I3DTN4), Bacillus methanolicus (I3DTP3), Bacillus methanolicus (I3DZ65), Bacillus methanolicus, Bacillus methanolicus MGA3 / ATCC53907 (I3DTN4), Bacillus methanolicus MGA3 / ATCC53907 (I3DZ65), Bacillus methanolicus PB1 / NCIMB13113 (I3DTP3)
Shen, M.H.; Song, H.; Li, B.Z.; Yuan, Y.J.
Deletion of D-ribulose-5-phosphate 3-epimerase (RPE1) induces simultaneous utilization of xylose and glucose in xylose-utilizing Saccharomyces cerevisiae
Biotechnol. Lett.
37
1031-1036
2015
Saccharomyces cerevisiae (P46969), Saccharomyces cerevisiae, Saccharomyces cerevisiae ATCC 204508 / S288c (P46969)
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