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Information on EC 3.5.4.3 - guanine deaminase and Organism(s) Homo sapiens

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EC Tree
     3 Hydrolases
         3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
             3.5.4 In cyclic amidines
                3.5.4.3 guanine deaminase
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This record set is specific for:
Homo sapiens
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Word Map
The taxonomic range for the selected organisms is: Homo sapiens
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Reaction Schemes
Synonyms
guanase, guanine deaminase, cypin, agdap, guanine aminohydrolase, ne0047, cytosolic psd-95 interactor, gdease, human guanine deaminase, e. coli guanine deaminase, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
GDEase
-
-
-
-
guanase
guanine aminase
-
-
-
-
Guanine aminohydrolase
-
-
-
-
human guanine deaminase
-
p51-nedasin
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
amidine hydrolysis
-
-
-
-
PATHWAY SOURCE
PATHWAYS
-
-, -, -, -, -
SYSTEMATIC NAME
IUBMB Comments
guanine aminohydrolase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9033-16-3
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
8-azaguanine + H2O
8-azaxanthine + NH3
show the reaction diagram
adenine + H2O
allopurinol + NH3
show the reaction diagram
-
-
-
-
?
adenosine + H2O
inosine + NH3
show the reaction diagram
-
-
-
-
?
ammelide + H2O
cyanuric acid + NH3
show the reaction diagram
the absolute activity toward ammelide is 7 orders of magnitude lower than the activity of wild type GDA for guanine
-
-
?
ammeline + H2O
ammelide + NH3
show the reaction diagram
-
-
-
ir
AMP + H2O
IMP + NH3
show the reaction diagram
-
-
-
-
?
GMP + H2O
XMP + NH3
show the reaction diagram
-
-
-
-
?
guanine + H2O
xanthine + NH3
show the reaction diagram
guanosine + H2O
xanthosine + NH3
show the reaction diagram
-
-
-
-
?
additional information
?
-
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
guanine + H2O
xanthine + NH3
show the reaction diagram
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Mn2+
addition results in 2fold increase of activity
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2,6-diaminopurine
-
5-amino-4-imidazole carboxamide
-
5-aminoimidazole-4-carboxamide
7-methylguanine
-
adenine
-
-
adenosine
-
-
hypoxanthine
Inosine
iodoacetic acid
-
0.1 mM 7% loss in the activity, 1 mM 29% loss in the activity after 30 min incubation
N-2-acetylguanine
-
natural inhibitor protein
-
-
-
p-hydroxymercuribenzoate
Rose bengal
-
photo-oxidation, 0.00025% at acidic pH
uric acid
-
xanthine
Xanthosine
-
-
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.2
8-Azaguanine
-
at pH 6
0.0026 - 0.0417
guanine
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
21.5
-
-
21.7
-
-
22.1
-
-
8.61
-
-
9.53
recombinant enzyme
additional information
-
colorimetric and HPLC assay method using guanosine as a prosubstrate. Method is suitable for routine assays for measuring plasma enzyme over a wide range of activites
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
6
-
8-azaguanine as substrate
7
recombinant protein, expressed in mice DH5-alpha cells, Km remains constant between pH 6.5 and pH 7.5
7.4
-
isoenzyme A
7.5 - 9.5
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
5 - 10.5
-
-
5.5 - 9
-
-
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
cancerous and non-cancerous
Manually annotated by BRENDA team
-
-
Manually annotated by BRENDA team
-
of a patient with resected gastric cancer
Manually annotated by BRENDA team
-
metastatic
Manually annotated by BRENDA team
additional information
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
GENERAL INFORMATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
physiological function
GDA (cypin) mediates microtubule assembly
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
GUAD_HUMAN
454
0
51003
Swiss-Prot
other Location (Reliability: 5)
A0A024R231_HUMAN
454
0
51003
TrEMBL
other Location (Reliability: 5)
B4DIP8_HUMAN
178
0
19279
TrEMBL
other Location (Reliability: 1)
Q5SZC3_HUMAN
179
0
19310
TrEMBL
other Location (Reliability: 2)
H0YDZ7_HUMAN
176
0
19051
TrEMBL
other Location (Reliability: 2)
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
100000
110000
-
liver, gel filtration
120000
200000
220000
-
gel filtration without mercaptoethanol
240000
-
gel filtration without thiol present, enzyme aggregation
50000
51040
calculated from cDNA corresponding to an open reading frame
55000
59000
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
40
-
stable up to
45
-
relatively stable, incubation for 5 min, 3% loss in activity, 17% after 30 min
55
-
becomes labile at, loses 21% of activity after 5 min incubation, 49% after 30 min
60
-
50% activity lost during 30 min incubation, after 60 min 40% activity remains
65
-
activity completely lost after 30 min incubation
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
HiTrap IMAC column chromatography
Ni-NTAcolumn chromatography
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
cloned from kidney and brain cDNA libraries, PCR, subcloned into bacterial expression vector pMAL-c2, expressed in mice DH5-alpha cells and purified
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
analysis
-
colorimetric and HPLC assay method using guanosine as a prosubstrate. Method is suitable for routine assays for measuring plasma enzyme over a wide range of activites
medicine
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Kimm, S.W.; Park, J.B.; Kim, H.L.
The physicochemical properties of guanine aminohydrolase purified from human liver
Korean J. Biochem.
19
39-46
1987
Oryctolagus cuniculus, Homo sapiens, Rattus norvegicus, Sus sp.
-
Manually annotated by BRENDA team
Kimm, S.W.; Park, J.B.; Lee, I.S.
Purification and characterization of guanine aminohydrolase from human liver
Korean J. Biochem.
17
139-148
1985
Oryctolagus cuniculus, Homo sapiens, Rattus norvegicus
-
Manually annotated by BRENDA team
Gupta, N.K.; Glantz, M.D.
Isolation and characterization of human liver guanine deaminase
Arch. Biochem. Biophys.
236
266-276
1985
Bos taurus, Oryctolagus cuniculus, Homo sapiens, Rattus norvegicus, Sus sp.
Manually annotated by BRENDA team
Pugh, M.E.; Bieber, A.L.
Studies of rabbit brain, intestine and liver guanine aminohydrolase
Comp. Biochem. Physiol. B
77
619-627
1984
Bos taurus, Cavia porcellus, Oryctolagus cuniculus, Homo sapiens, Ovis ammon, Sus sp.
Manually annotated by BRENDA team
Kim, C.J.; Kimm, S.W.
Enzymatic evidence for a mitochondrial inhibitor of guanine aminohydrolase in rat liver
Korean J. Biochem.
14
77-93
1982
Clostridium sp., Homo sapiens, Mus musculus, Ophiodon elongatus, Rattus norvegicus, Rattus norvegicus Sprague Dawley
-
Manually annotated by BRENDA team
Kuzmits, R.; Stemberger, H.; Muller, M.M.
Guanase from human liver - purification and characterization
Adv. Exp. Med. Biol.
122B
183-188
1980
Homo sapiens, Mus musculus, Rattus norvegicus
Manually annotated by BRENDA team
Fogle, P.J.; Bieber, A.L.
Purification of rabbit liver guanine aminohydrolase
Prep. Biochem.
5
59-77
1975
Oryctolagus cuniculus, Homo sapiens, Ophiodon elongatus, Rattus norvegicus
Manually annotated by BRENDA team
Ito, S.; Maeda, T.; Iwasaki, A.; Fujikawa, H.; Okahisa, T.; Saijyou, T.; II, K.; Sano, N.; Matsuda, Y.; Endo, H.
Histochemical and biochemical studies on guanase in the human and rat kidney
Acta Histochem.
24
591-596
1991
Homo sapiens, Mus musculus, Rattus norvegicus
-
Manually annotated by BRENDA team
Canbolat, O.; Durak, I.; Cetin, R.; Kavutcu, M.; Demirci, S.; Oeztuerk, S.
Activities of adenosine deaminase, 5'-nucleotidase, guanase, and cytidine deaminase enzymes in cancerous and non-cancerous human breast tissues
Breast Cancer Res. Treat.
37
189-193
1996
Homo sapiens
Manually annotated by BRENDA team
Rajappan, V.P.; Hosmane, R.
Analogues of azepinomycin as inhibitors of guanase
Nucleosides Nucleotides
17
1141-1151
1998
Oryctolagus cuniculus, Homo sapiens
Manually annotated by BRENDA team
Yuan, G.; Bin, J.C.; McKay, D.J.; Snyder, F.F.
Cloning and characterization of human guanine deaminase. Purification and partial amino acid sequence of the mouse protein
J. Biol. Chem.
274
8175-8180
1999
Mus musculus, Sus sp., Homo sapiens (Q9Y2T3), Homo sapiens
Manually annotated by BRENDA team
Maynes, J.T.; Yuan, R.G.; Snyder, F.F.
Identification, expression and characterization of Escherichia coli guanine deaminase
J. Bacteriol.
8
4658-4660
2000
Escherichia coli, Homo sapiens (Q9Y2T3), Homo sapiens
Manually annotated by BRENDA team
Roberts, E.L.; Newton, R.P.
Estimation of guanine deaminase using guanosine as a "prosubstrate"
Anal. Biochem.
324
250-257
2004
Homo sapiens
Manually annotated by BRENDA team
Sannomiya, K.; Honda, H.; Kubo, K.; Ii, K.; Yuan, Y.; Aoyagi, E.; Muguruma, N.; Shimizu, I.; Ito, S.
A histochemical and immunohistochemical investigation of guanase and nedasin in rat and human tissues
J. Med. Invest.
53
246-254
2006
Homo sapiens, Rattus norvegicus
Manually annotated by BRENDA team
Kubo, K.; Honda, H.; Honda, H.; Sannomiya, K.; Aying, Y.; Mei, W.; Mi, S.; Aoyagi, E.; Simizu, I.; Ii, K.; Ito, S.
Histochemical and immunohistochemical investigation of guanase and nedasin in human tissues
J. Med. Invest.
53
264-270
2006
Homo sapiens
Manually annotated by BRENDA team
Fernandez, J.R.; Sweet, E.S.; Welsh, W.J.; Firestein, B.L.
Identification of small molecule compounds with higher binding affinity to guanine deaminase (cypin) than guanine
Bioorg. Med. Chem.
18
6748-6755
2010
Oryctolagus cuniculus, Rattus norvegicus, Homo sapiens (Q9Y2T3), Homo sapiens
Manually annotated by BRENDA team
Seffernick, J.L.; Dodge, A.G.; Sadowsky, M.J.; Bumpus, J.A.; Wackett, L.P.
Bacterial ammeline metabolism via guanine deaminase
J. Bacteriol.
192
1106-1112
2010
Bradyrhizobium japonicum, Bradyrhizobium japonicum USDA 110, Escherichia coli, Homo sapiens (Q9Y2T3), Pseudomonas putida, Pseudomonas putida KT 2240
Manually annotated by BRENDA team
Murphy, P.M.; Bolduc, J.M.; Gallaher, J.L.; Stoddard, B.L.; Baker, D.
Alteration of enzyme specificity by computational loop remodeling and design
Proc. Natl. Acad. Sci. USA
106
9215-9220
2009
Homo sapiens (Q9Y2T3), Homo sapiens
Manually annotated by BRENDA team