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Information on EC 3.5.1.1 - asparaginase and Organism(s) Pseudomonas aeruginosa

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EC Tree
     3 Hydrolases
         3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
             3.5.1 In linear amides
                3.5.1.1 asparaginase
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This record set is specific for:
Pseudomonas aeruginosa
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Word Map
The taxonomic range for the selected organisms is: Pseudomonas aeruginosa
The expected taxonomic range for this enzyme is: Bacteria, Eukaryota, Archaea
Reaction Schemes
Synonyms
asparaginase, l-asnase, asrgl1, asparaginase ii, l-asparaginase ii, erwinase, ecaii, l-asparaginase i, ecaiii, diasp, more
SYNONYM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
alpha-asparaginase
-
-
-
-
asparaginase II
-
-
-
-
colaspase
-
-
-
-
crasnitin
-
-
-
-
DiAsp
-
-
-
-
elspar
-
-
-
-
L-ASNase
-
-
-
-
L-asparaginase
L-asparagine amidohydrolase
-
-
-
-
leunase
-
-
-
-
REACTION TYPE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
carboxylic acid amide hydrolysis
-
-
-
-
SYSTEMATIC NAME
IUBMB Comments
L-asparagine amidohydrolase
-
CAS REGISTRY NUMBER
COMMENTARY hide
9015-68-3
-
SUBSTRATE
PRODUCT                       
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
Reversibility
r=reversible
ir=irreversible
?=not specified
acrylamide + H2O
acrylic acid + NH3
show the reaction diagram
-
-
-
-
?
L-Asn + H2O
L-Asp + NH3
show the reaction diagram
-
-
-
-
?
L-asparagine + H2O
L-aspartate + NH3
show the reaction diagram
L-glutamine + H2O
L-glutamate + NH3
show the reaction diagram
-
reaction of EC 3.5.1.2
-
-
?
urea + H2O
? + NH3
show the reaction diagram
-
-
-
-
?
NATURAL SUBSTRATE
NATURAL PRODUCT
REACTION DIAGRAM
ORGANISM
UNIPROT
COMMENTARY
(Substrate) hide
LITERATURE
(Substrate)
COMMENTARY
(Product) hide
LITERATURE
(Product)
REVERSIBILITY
r=reversible
ir=irreversible
?=not specified
L-Asn + H2O
L-Asp + NH3
show the reaction diagram
-
-
-
-
?
L-asparagine + H2O
L-aspartate + NH3
show the reaction diagram
-
-
-
-
?
METALS and IONS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
Cu2+
-
2 mM, 114% of initial activity
Mn2+
-
2 mM, 112% of initial activity
Na+
-
2 mM, 113% of initial activity
Triton X-100
-
2 mM, 114% of initial activity
Zn2+
1 mM, 109% of initial activity, 5 mM, 86% of initial activity
INHIBITOR
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
Ca2+
-
2 mM, 64% of initial activity
Co2+
-
2 mM, 67% of initial activity
Fe2+
-
5 mM, 82% of initial activity
Hg2+
-
2 mM, 2% of initial activity
K+
-
2 mM, 69% of initial activity
SDS
-
2 mM, 30% of initial activity
additional information
-
glucose, in supplemented culture medium, causes a slight suppression of enzyme expression in wild-type strain NRRL B771
-
ACTIVATING COMPOUND
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
2-mercaptoethanol
1 mM, 113% of initial activity
EDTA
1 mM, 105% of initial activity, 5 mM
KM VALUE [mM]
SUBSTRATE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
IMAGE
0.147
L-Asn
-
-
0.147 - 63.3
L-asparagine
SPECIFIC ACTIVITY [µmol/min/mg]
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
1900
-
purified enzyme
5925
-
pH not specified in the publication, temperature not specified in the publication
pH OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pH RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE OPTIMUM
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
TEMPERATURE RANGE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
pI VALUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
4.7
-
calculated from sequence
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
-
solid state, production evaluation and optimization of culture conditions using factorial designs
Manually annotated by BRENDA team
additional information
-
a pH of 7.9, casein hydrolysate (3.11%) and corn-steep liquor (3.68%) are the most significant factors improving the enzyme production process
Manually annotated by BRENDA team
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
UNIPROT
ENTRY NAME
ORGANISM
NO. OF AA
NO. OF TRANSM. HELICES
MOLECULAR WEIGHT[Da]
SOURCE
SEQUENCE
LOCALIZATION PREDICTION?
A0A2C9WZ01_PSEAI
328
0
34742
TrEMBL
-
A0A069Q8Z9_PSEAI
362
0
38644
TrEMBL
-
A0A5E5QVE8_PSEAI
291
0
30676
TrEMBL
-
A0A0U3U5E8_PSEAI
328
0
34665
TrEMBL
-
A0A0M3TSI6_PSEAI
362
0
38643
TrEMBL
-
A0A7D7L7P6_PSEAI
306
0
32594
TrEMBL
-
MOLECULAR WEIGHT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
160000
SUBUNIT
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
dimer
-
2 * 36300, SDS-PAGE, 2 * 36276, calculated from sequence
monomer
-
1 * 160000, SDS-PAGE
CRYSTALLIZATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
molecular modeling of structure
-
PROTEIN VARIANTS
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
additional information
-
recombinant expression of Vitreoscilla hemoglobin, VHb, in Pseudomonas aeruginosa strain PaJC, the L-asparaginase expression in the recombinant strain is stimulated by glucose, while it is slightly repressed in the wild-type strain NRRL B771, and shows increased enzyme production due to increased oxygen uptake caused by VHb and preference for glucose to other sugars as growth carbon source, optimization of L-asparaginase production, overview
TEMPERATURE STABILITY
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
37
20 min, almost 80% residual activity, 30 min, almost 60% residual activity
PURIFICATION (Commentary)
ORGANISM
UNIPROT
LITERATURE
native enzyme from strain 50071, grown on solid-state fermentation, 106fold to homogeneity by ammonium sulfate fractionation, gel filtration, and ion exchange chromatography
-
recombinant protein
CLONED (Commentary)
ORGANISM
UNIPROT
LITERATURE
expression in Escherichia coli
EXPRESSION
ORGANISM
UNIPROT
LITERATURE
the maximum amount of L-asparaginase produced is 785U/ml from the optimized medium containing L-asparagine (0.5%), glucose (0.2%), NaCl (0.045%)and K2HPO4 (0.045%)
-
APPLICATION
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
medicine
pharmacology
-
L-asparaginase is a cancer chemotherapeutically important enzyme
REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Abdel-Fattah, Y.R.; Olama, Z.A.
L-asparaginase production by Pseudomonas aeruginosa in solid-state culture: evaluation and optimization of culture conditions using factorial designs
Process Biochem.
38
115-122
2002
Pseudomonas aeruginosa, Pseudomonas aeruginosa 50071
-
Manually annotated by BRENDA team
El-Bessoumy, A.A.; Sarhan, M.; Mansour, J.
Production, isolation, and purification of L-asparaginase from Pseudomonas aeruginosa 50071 using solid-state fermentation
J. Biochem. Mol. Biol.
37
387-393
2004
Pseudomonas aeruginosa, Pseudomonas aeruginosa 50071
Manually annotated by BRENDA team
Geckil, H.; Gencer, S.; Ates, B.; Ozer, U.; Uckun, M.; Yilmaz, I.
Effect of Vitreoscilla hemoglobin on production of a chemotherapeutic enzyme, L-asparaginase, by Pseudomonas aeruginosa
Biotechnol. J.
1
203-208
2006
Pseudomonas aeruginosa, Pseudomonas aeruginosa NRRL B771
Manually annotated by BRENDA team
Verma, N.; Kumar, K.; Kaur, G.; Anand, S.
L-asparaginase: a promising chemotherapeutic agent
Crit. Rev. Biotechnol.
27
45-62
2007
Aliivibrio fischeri, Enterobacter cloacae, Aspergillus niger, Aspergillus tamarii, Aspergillus terreus, Saccharomyces cerevisiae, Saccharomyces cerevisiae (P38986), Cyberlindnera jadinii, Escherichia coli, Erwinia aroidea, Pectobacterium carotovorum, Erwinia sp., Thermus thermophilus, Lupinus angustifolius, Lupinus arboreus, Mycolicibacterium phlei, Nocardia asteroides, Photobacterium leiognathi, Photobacterium phosphoreum, Pseudomonas aeruginosa, Pseudomonas putida, Pseudomonas fluorescens, Rhodotorula toruloides, Rhodotorula mucilaginosa, Serratia marcescens, Sphagnum fallax, Staphylococcus sp., Tetrahymena pyriformis, Vibrio harveyi, Erwinia aroidea NRR LB-138, Pseudomonas aeruginosa 50071
Manually annotated by BRENDA team
Badoei-Dalfard, A.
Purification and characterization of L-asparaginase from Pseudomonas aeruginosa strain SN004 Production optimization by statistical methods
Biocatal. Agricult. Biotechnol.
4
388-397
2015
Pseudomonas aeruginosa, Pseudomonas aeruginosa SN004
-
Manually annotated by BRENDA team
El-Sharkawy, A.; Farag, A.; Embaby, A.; Saeed, H.; El-Shenawy, M.
Cloning, expression and characterization of aeruginosa EGYII L-asparaginase from Pseudomonas aeruginosa strain EGYII DSM 101801 in E.coli BL21(DE3) pLysS
J. Mol. Catal. B
132
16-23
2016
Pseudomonas aeruginosa (A0A0U3U5E8), Pseudomonas aeruginosa DSM 101801 (A0A0U3U5E8)
-
Manually annotated by BRENDA team
Saeed, H.; Soudan, H.; El-Sharkawy, A.; Farag, A.; Embaby, A.; Ataya, F.
Expression and functional characterization of Pseudomonas aeruginosa recombinant L.asparaginase
Protein J.
37
461-471
2018
Pseudomonas aeruginosa
Manually annotated by BRENDA team