Reference on EC 3.2.1.68 - isoamylase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Amemura, A.; Chakraborty, R.; Fujita, M.; Noumi, T.; Masamitsu, F.
Cloning and nucleotide sequence of the isoamylase gene from Pseudomonas amyloderamosa SB-15
J. Biol. Chem.
263
9271-9275
1988
Pseudomonas amyloderamosa
Ishizaki, Y.; Taniguchi, H.; Maruyama, Y.; Nakamura, M.
Debranching enzymes of potato tubers (Solanum tuberosum L.). I. Purification and some properties of potato isoamylase
Agric. Biol. Chem.
47
771-779
1983
Solanum tuberosum
-
Spencer-Martins, I.
Extracellular isoamylase produced by the yeast Lipomyces kononenkoae
Appl. Environ. Microbiol.
44
1253-1257
1982
Lipomyces kononenkoae
Amemura, A.; Konishi, Y.; Harada, T.
Molecular weight of the undegraded polypeptide chain of Pseudomonas amyloderamosa isoamylase
Biochim. Biophys. Acta
611
390-393
1980
Pseudomonas amyloderamosa
Kato, K.; Konishi, Y.; Amemura, A.; Harada, T.
Affinity chromatography of Pseudomonas isoamylase on cross-linked amylose gel
Agric. Biol. Chem.
41
2077-2080
1977
Pseudomonas amyloderamosa
-
Kitagawa, H.; Amemura, A.; Harada, T.
Studies on the inhibition and molecular properties of crystalline Pseudomonas isoamylase
Agric. Biol. Chem.
39
989-994
1975
Pseudomonas amyloderamosa
-
Lee, E.Y.C.; Whelan, W.J.
Glycogen and starch debranching enzymes
The Enzymes, 3rd Ed. (Boyer, P. D. , ed. )
5
191-234
1972
Cytophaga sp., Pseudomonas amyloderamosa
-
Yokobayashi, K.; Misaki, A.; Harada, T.
Purification and properties of Pseudomonas isoamylase
Biochim. Biophys. Acta
212
458-469
1970
Pseudomonas amyloderamosa
Fujita, F.; Sakai, S.; Futai, M.; Amemura, A.
Characterization of an isoamylase-hyperproducing mutant of Pseudomonas amyloderamosa
Agric. Biol. Chem.
54
2315-2321
1990
Pseudomonas amyloderamosa, Pseudomonas amyloderamosa MI-414
-
Katsuya, Y.; Mezaki, Y.; Kubota, M.; Matsuura, Y.
Three-dimensional structure of Pseudomonas isoamylase at 2.2 A resolution
J. Mol. Biol.
281
885-897
1998
Pseudomonas amyloderamosa
Ara, K.; Saeki, K.; Ito, S.
Purification and characterization of an alkaline isomylase from an alkalophilic strain of Bacillus
J. Gen. Microbiol.
139
781-786
1993
Bacillus sp. (in: Bacteria), Pseudomonas amyloderamosa, Pseudomonas amyloderamosa SMP1
-
Lin, L.L.; Fang, T.Y.; Chu, W.S.; Hsu, W.H.
Improved elution of isoamylase adsorbed on raw starch and the preservation of purified enzyme
Lett. Appl. Microbiol.
19
383-385
1994
Pseudomonas amyloderamosa, Pseudomonas amyloderamosa WU-5315
-
Clave, P.; Guillaumes, S.; Blanco, I.; Nabau, N.; Merce, J.; Farre, A.; Marruecos, L.; Lluis, F.
Amylase, lipase, pancreatic isoamylase, and phospholipase A in diagnosis of acute pancreatitis
Clin. Chem.
41
1129-1134
1995
Homo sapiens
Ito, S.; Kobayashi, T.; Ara, K.; Ozaki, K.; Kawai, S.; Hatada, Y.
Alkaline detergent enzymes from alkaliphiles: enzymatic properties, genetics, and structures
Extremophiles
2
185-190
1998
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) KSM-K16
Krohn, M.; Barry, G.F.; Kishore, G.M.
An isoamylase with neutral pH optimum from a Flavobacterium species: cloning, characterization and expression of the iam gene
Mol. Gen. Genet.
254
469-478
1997
Flavobacterium sp., Pseudomonas amyloderamosa, Pseudomonas amyloderamosa JD210, Pseudomonas amyloderamosa SMP1
Rahman, A.; Wong, K.s.; Jane, J.l.; Myers, A.M.; James, M.G.
Characterization of SU1 isoamylase, a determinant of storage starch structure in maize
Plant Physiol.
117
425-435
1998
Zea mays
Fujita, N.; Kubo, A.; Francisco, P.B.Jr.; Nakakita, M.; Harada, K.; Minaka, N.; Nakamura, Y.
Purification, characterization, and cDNA structure of isoamylase from developing endosperm of rice
Planta
208
283-293
1999
Oryza sativa
Lim, W.J.; Park, S.R.; Cho, S.J.; Kim, M.K.; Ryu, S.K.; Hong, S.Y.; Seo, W.T.; Kim, H.; Yun, H.D.
Cloning and characterization of an intracellular isoamylase gene from Pectobacterium chrysanthemi PY35
Biochem. Biophys. Res. Commun.
287
348-354
2001
Dickeya chrysanthemi, Dickeya chrysanthemi PY35
Hussain, H.; Mant, A.; Seale, R.; Zeeman, S.; Hinchliffe, E.; Edwards, A.; Hylton, C.; Bornemann, S.; Smith, A.M.; Martin, C.; Bustos, R.
Three isoforms of isoamylase contribute different catalytic properties for the debranching of potato glucans
Plant Cell
15
133-149
2003
Solanum tuberosum (Q84YG5), Solanum tuberosum (Q84YG6), Solanum tuberosum (Q84YG7), Solanum tuberosum
Dauvillee, D.; Colleoni, C.; Mouille, G.; Morell, M.K.; d'Hulst, C.; Wattebled, F.; Lienard, L.; Delvalle, D.; Ral, J.P.; Myers, A.M.; Ball, S.G.
Biochemical characterization of wild-type and mutant isoamylases of Chlamydomonas reinhardtii supports a function of the multimeric enzyme organization in amylopectin maturation
Plant Physiol.
125
1723-1731
2001
Chlamydomonas reinhardtii
Dauvillee, D.; Mestre, V.V.; Colleoni, C.; Slomianny, M.; Mouille, G.; Delrue, B.; d'Hulst, C.; Bliard, C.; Nuzillard, J.; Ball, S.
The debranching enzyme complex missing in glycogen accumulating mutants of Chlamydomonas reinhardtii displays an isoamylase-type specificity
Plant Sci.
157
145-156
2000
Chlamydomonas reinhardtii
Genschel, U.; Abel, G.; Loerz, H.; Luetticke, S.
The sugary-type isoamylase in wheat: tissue distribution and subcellular localisation
Planta
214
813-820
2002
Triticum aestivum
Bustos, R.; Fahy, B.; Hylton, C.M.; Seale, R.; Nebane, N.M.; Edwards, A.; Martin, C.; Smith, A.M.
Starch granule initiation is controlled by a heteromultimeric isoamylase in potato tubers
Proc. Natl. Acad. Sci. USA
101
2215-2220
2004
Solanum tuberosum
Kawagoe, Y.; Kubo, A.; Satoh, H.; Takaiwa, F.; Nakamura, Y.
Roles of isoamylase and ADP-glucose pyrophosphorylase in starch granule synthesis in rice endosperm
Plant J.
42
164-174
2005
Oryza sativa
Yoon, S.; Robyt, J.F.
Activation and stabilization of 10 starch-degrading enzymes by Triton X-100, polyethylene glycols, and polyvinyl alcohols
Enzyme Microb. Technol.
37
556-562
2005
Pseudomonas amyloderamosa
-
Bierhals, J.D.; Lajolo, F.M.; Cordenunsi, B.R.; Oliveira do Nascimento, J.R.
Activity, cloning, and expression of an isoamylase-type starch-debranching enzyme from banana fruit
J. Agric. Food Chem.
52
7412-7418
2004
Musa acuminata
Delatte, T.; Umhang, M.; Trevisan, M.; Eicke, S.; Thorneycroft, D.; Smith, S.M.; Zeeman, S.C.
Evidence for distinct mechanisms of starch granule breakdown in plants
J. Biol. Chem.
281
12050-12059
2006
Arabidopsis thaliana
Fang, T.; Tseng, W.; Yu, C.; Shih, T.
Characterization of the thermophilic isoamylase from the thermophilic archaeon Sulfolobus solfataricus ATCC 35092
J. Mol. Catal. B
33
99-107
2005
Saccharolobus solfataricus
-
Delatte, T.; Trevisan, M.; Parker, M.L.; Zeeman, S.C.
Arabidopsis mutants Atisa1 and Atisa2 have identical phenotypes and lack the same multimeric isoamylase, which influences the branch point distribution of amylopectin during starch synthesis
Plant J.
41
815-830
2005
Arabidopsis thaliana
Kubo, A.; Rahman, S.; Utsumi, Y.; Li, Z.; Mukai, Y.; Yamamoto, M.; Ugaki, M.; Harada, K.; Satoh, H.; Konik-Rose, C.; Morell, M.; Nakamura, Y.
Complementation of sugary-1 phenotype in rice endosperm with the wheat isoamylase1 gene supports a direct role for isoamylase1 in amylopectin biosynthesis
Plant Physiol.
137
43-56
2005
Triticum aestivum
Wattebled, F.; Dong, Y.; Dumez, S.; Delvalle, D.; Planchot, V.; Berbezy, P.; Vyas, D.; Colonna, P.; Chatterjee, M.; Ball, S.; D'Hulst, C.
Mutants of Arabidopsis lacking a chloroplastic isoamylase accumulate phytoglycogen and an abnormal form of amylopectin
Plant Physiol.
138
184-195
2005
Arabidopsis thaliana (O04196), Arabidopsis thaliana (Q8L735), Arabidopsis thaliana (Q9M0S5)
Park, H.S.; Park, J.T.; Kang, H.K.; Cha, H.; Kim, D.S.; Kim, J.W.; Park, K.H.
TreX from Sulfolobus solfataricus ATCC 35092 displays isoamylase and 4-alpha-glucanotransferase activities
Biosci. Biotechnol. Biochem.
71
1348-1352
2007
Saccharolobus solfataricus
Kang, H.K.; Cha, H.; Yang, T.J.; Park, J.T.; Lee, S.; Kim, Y.W.; Auh, J.H.; Okada, Y.; Kim, J.W.; Cha, J.; Kim, C.H.; Park, K.H.
Enzymatic synthesis of dimaltosyl-beta-cyclodextrin via a transglycosylation reaction using TreX, a Sulfolobus solfataricus P2 debranching enzyme
Biochem. Biophys. Res. Commun.
366
98-103
2008
Pseudomonas amyloderamosa
Takashima, Y.; Senoura, T.; Yoshizaki, T.; Hamada, S.; Ito, H.; Matsui, H.
Differential chain-length specificities of two isoamylase-type starch-debranching enzymes from developing seeds of kidney bean
Biosci. Biotechnol. Biochem.
71
2308-2312
2007
Phaseolus vulgaris (A4PIS8), Phaseolus vulgaris (A4PIS9), Phaseolus vulgaris (A4PIT0), Phaseolus vulgaris
Li, L.; Ilarslan, H.; James, M.G.; Myers, A.M.; Wurtele, E.S.
Genome wide co-expression among the starch debranching enzyme genes AtISA1, AtISA2, and AtISA3 in Arabidopsis thaliana
J. Exp. Bot.
58
3323-3342
2007
Arabidopsis thaliana
Utsumi, Y.; Nakamura, Y.
Structural and enzymatic characterization of the isoamylase1 homo-oligomer and the isoamylase1-isoamylase2 hetero-oligomer from rice endosperm
Planta
225
75-87
2006
Oryza sativa, Oryza sativa (O80403)
Park, I.M.; Ibanez, A.M.; Shoemaker, C.F.
Rice starch molecular size and its relationship with amylose content
Starch Staerke
59
69-77
2007
Pseudomonas amyloderamosa
-
Woo, E.J.; Lee, S.; Cha, H.; Park, J.T.; Yoon, S.M.; Song, H.N.; Park, K.H.
Structural Insight into the Bifunctional Mechanism of the Glycogen-debranching Enzyme TreX from the Archaeon Sulfolobus solfataricus
J. Biol. Chem.
283
28641-28648
2008
Saccharolobus solfataricus
Wang, S.; Lai, J.; Huang, M.; Tai, C.; Liu, H.
Deactivation of isoamylase and β-amylase in the agitated reactor under supercritical carbon dioxide
Bioprocess Biosyst. Eng.
33
1007-1015
2010
Pseudomonas amyloderamosa, Pseudomonas amyloderamosa WU7211-2
Mutungi, C.; Onyango, C.; Jaros, D.; Henle, T.; Rohm, H.
Determination of optimum conditions for enzymatic debranching of cassava starch and synthesis of resistant starch type III using central composite rotatable design
Starch Staerke
61
367-376
2009
Pseudomonas sp.
-
Hussain, H.; Martin, C.
Comparative analysis of primary and secondary structure for pea isoamylase isoforms predicts different catalytic properties against glucan substrates
Starch Staerke
61
570-577
2009
Pisum sativum
-
Ray, R.
Microbial isoamylases: An overview
Am. J. Food Technol.
6
1-18
2011
Myroides odoratus, Pseudomonas amyloderamosa (P10342), Pseudomonas amyloderamosa SB-15 (P10342)
-
Yun, M.S.; Umemoto, T.; Kawagoe, Y.
Rice debranching enzyme isoamylase3 facilitates starch metabolism and affects plastid morphogenesis
Plant Cell Physiol.
52
1068-1082
2011
Oryza sativa
Kubo, A.; Colleoni, C.; Dinges, J.R.; Lin, Q.; Lappe, R.R.; Rivenbark, J.G.; Meyer, A.J.; Ball, S.G.; James, M.G.; Hennen-Bierwagen, T.A.; Myers, A.M.
Functions of heteromeric and homomeric isoamylase-type starch-debranching enzymes in developing maize endosperm
Plant Physiol.
153
956-969
2010
Zea mays (Q84UE6), Zea mays
Utsumi, Y.; Utsumi, C.; Sawada, T.; Fujita, N.; Nakamura, Y.
Functional diversity of isoamylase oligomers: the ISA1 homo-oligomer is essential for amylopectin biosynthesis in rice endosperm
Plant Physiol.
156
61-77
2011
Oryza sativa
Maruta, K.; Kubota, M.; Fukuda, S.; Kurimoto, M.
Cloning and nucleotide sequence of a gene encoding a glycogen debranching enzyme in the trehalose operon from Arthrobacter sp. Q36
Biochim. Biophys. Acta
1476
377-381
2000
Arthrobacter sp., Arthrobacter sp. Q36
Xu, Y.; Zhou, X.; Bai, Y.; Wang, J.; Wu, C.; Xu, X.; Jin, Z.
Cycloamylose production from amylomaize by isoamylase and Thermus aquaticus 4-alpha-glucanotransferase
Carbohydr. Polym.
102
66-73
2014
Pseudomonas sp.
Sim, L.; Beeren, S.R.; Findinier, J.; Dauvillee, D.; Ball, S.G.; Henriksen, A.; Palcic, M.M.
Crystal structure of the Chlamydomonas starch debranching enzyme isoamylase ISA1 reveals insights into the mechanism of branch trimming and complex assembly
J. Biol. Chem.
289
22991-23003
2014
Chlamydomonas reinhardtii (A8IQR3), Chlamydomonas reinhardtii (Q7X8Q2), Chlamydomonas reinhardtii, Chlamydomonas reinhardtii 330 (A8IQR3), Chlamydomonas reinhardtii 330 (Q7X8Q2)
Li, Y.; Niu, D.; Zhang, L.; Wang, Z.; Shi, G.
Purification, characterization and cloning of a thermotolerant isoamylase produced from Bacillus sp. CICIM 304
J. Ind. Microbiol. Biotechnol.
40
437-446
2013
Bacillus sp. (in: Bacteria) (L0C9D3), Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) CICIM 304 (L0C9D3)
Park, Y.; Nishikawa, T.; Tomooka, N.; Nemoto, K.
Molecular characterization of an isoamylase 1-type starch debranching enzyme (DBEI) in grain amaranth (Amaranthus cruentus L.)
Mol. Biol. Rep.
41
7857-7864
2014
Amaranthus cruentus (A0A0A8IC08)
Lin, Q.; Facon, M.; Putaux, J.L.; Dinges, J.R.; Wattebled, F.; DHulst, C.; Hennen-Bierwagen, T.A.; Myers, A.M.
Function of isoamylase-type starch debranching enzymes ISA1 and ISA2 in the Zea mays leaf
New Phytol.
200
1009-1021
2013
Zea mays, Zea mays (B6U0X5)
Facon, M.; Lin, Q.; Azzaz, A.M.; Hennen-Bierwagen, T.A.; Myers, A.M.; Putaux, J.L.; Roussel, X.; DHulst, C.; Wattebled, F.
Distinct functional properties of isoamylase-type starch debranching enzymes in monocot and dicot leaves
Plant Physiol.
163
1363-1375
2013
Zea mays, Zea mays (B6U0X5), Arabidopsis thaliana (O04196), Arabidopsis thaliana (Q8L735), Arabidopsis thaliana Col-0 (O04196), Arabidopsis thaliana Col-0 (Q8L735)
Sundberg, M.; Pfister, B.; Fulton, D.; Bischof, S.; Delatte, T.; Eicke, S.; Stettler, M.; Smith, S.M.; Streb, S.; Zeeman, S.C.
The heteromultimeric debranching enzyme involved in starch synthesis in Arabidopsis requires both isoamylase1 and isoamylase2 subunits for complex stability and activity
PLoS ONE
8
e75223
2013
Arabidopsis thaliana (O04196), Arabidopsis thaliana (Q8L735)
Ran, H.; Wu, J.; Wu, D.; Duan, X.
Enhanced production of recombinant Thermobifida fusca isoamylase in Escherichia coli MDS42
Appl. Biochem. Biotechnol.
180
464-476
2016
Thermobifida fusca
Li, Y.; Xu, J.; Zhang, L.; Ding, Z.; Gu, Z.; Shi, G.
Investigation of debranching pattern of a thermostable isoamylase and its application for the production of resistant starch
Carbohydr. Res.
446-447
93-100
2017
Lederbergia lentus
Hu, L.; Zheng, Y.; Peng, Y.; Yao, C.; Zhang, H.
The optimization of isoamylase processing conditions for the preparation of high-amylose ginkgo starch
Int. J. Biol. Macromol.
86
105-111
2016
Pseudomonas sp.
Li, Y.; Zhang, L.; Ding, Z.; Gu, Z.; Shi, G.
Engineering of isoamylase improvement of protein stability and catalytic efficiency through semi-rational design
J. Ind. Microbiol. Biotechnol.
43
3-12
2016
Lederbergia lentus, Lederbergia lentus JNU3
Nabemoto, M.; Watanabe, R.; Ohsu, M.; Sato, K.; Otani, M.; Nakayachi, O.; Watanabe, M.
Molecular characterization of genes encoding isoamylase-type debranching enzyme in tuberous root of sweet potato, Ipomoea batatas (L.) Lam.
Plant Biotechnol.
33
351-359
2016
Ipomoea batatas (Q1AJM7)
-
Kobayashi, T.; Sasaki, S.; Utsumi, Y.; Fujita, N.; Umeda, K.; Sawada, T.; Kubo, A.; Abe, J.; Colleoni, C.; Ball, S.; Nakamura, Y.
Comparison of chain-length preferences and glucan specificities of isoamylase-type alpha-glucan debranching enzymes from rice, Cyanobacteria, and Bacteria
PLoS ONE
11
e0157020
2016
Escherichia coli, Oryza sativa, Pseudomonas amyloderamosa, Synechococcus elongatus, Crocosphaera subtropica ATCC 51142, Synechococcus elongatus PCC7942
Shufen, C.; Yicong, C.; Baobing, F.; Guiai, J.; Zhonghua, S.; Ju, L.; Shaoqing, T.; Jianlong, W.; Peisong, H.; Xiangjin, W.
Editing of rice isoamylase gene ISA1 provides insights into its function in starch formation
Rice Sci.
26
77-87
2019
Oryza sativa Japonica Group
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