Reference on EC 1.12.2.1 - cytochrome-c3 hydrogenase
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REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Kobayashi, K.; Morisawa, Y.; Ishituka, T.; Ishimoto, M.
Biochemical studies on sulfate-reducing bacteria. XIV. Enzyme levels of adenylylsulfate reductase, inorganic pyrophosphatase, sulfite reductase, hydrogenase, and adenosine triphosphatase in cells grown on sulfate, sulfite, and thiosulfate
J. Biochem.
78
1079-1085
1975
Bacteria, Desulfovibrio vulgaris, Electron
Bingemann, R.; Klein, A.
Conversion of the central [4Fe-4S] cluster into a [3Fe-4S] cluster leads to reduced hydrogen-uptake activity of the F420-reducing hydrogenase of Methanococcus voltae
Eur. J. Biochem.
267
6612-6618
2000
Desulfomicrobium baculatum
Odom, J.M.; Peck, H.D.
Hydrogenase, electron-transfer proteins, and energy coupling in the sulfate-reducing bacteria Desulfovibrio
Annu. Rev. Microbiol.
38
551-592
1984
Desulfovibrio desulfuricans, Megalodesulfovibrio gigas, Desulfovibrio vulgaris, Desulfovibrio desulfuricans Norway 4, Desulfovibrio vulgaris Hildenborough
Lalla-Maharajh, W.V.; Hall, D.O.; Cammack, R.; Rao, K.K.
Purification and properties of the membrane-bound by hydrogenase from Desulfovibrio desulfuricans
Biochem. J.
209
445-454
1983
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans Norway
Yagi, T.; Honya, M.; Tamiya, N.
Purification and properties of hydrogenases of different origins
Biochim. Biophys. Acta
153
699-705
1968
Desulfovibrio desulfuricans
Yagi, T.; Kimura, K.; Daidoji, H.; Sakai, F.; Tamura, S.; Inokuchi, H.
Properties of purified hydrogenase from the particulate fraction of Desulfovibrio vulgaris, Miyazaki
J. Biochem.
79
661-671
1976
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki
Grande, H.J.; van Berkel-Arts, A.; Bregh, J.; van Dijk, K.; Veeger, C.
Kinetic properties of hydrogenase isolated from Desulfovibrio vulgaris (Hildenborough)
Eur. J. Biochem.
131
81-88
1983
Desulfovibrio vulgaris
Castro, M.J.M.; Cabral, J.M.S.
Kinetic studies of hydrogenase in AOT reversed micelles
Enzyme Microb. Technol.
11
6-11
1989
Megalodesulfovibrio gigas
-
Castro, M.J.M.; Cabral, J.M.S.
Stability of hydrogenase in AOT reversed micelles
Enzyme Microb. Technol.
11
668-672
1989
Megalodesulfovibrio gigas
-
Higuchi, Y.; Yasuoka, N.; Kakudo, M.; Katsube, Y.; Yagi, T.; Inokuchi, H.
Single crystals of hydrogenase from Desulfovibrio vulgaris Miyazaki F
J. Biol. Chem.
262
2823-2825
1987
Desulfovibrio vulgaris
Rieder, R.; Cammack, R.; Hall, D.O.
Purification and properties of the soluble hydrogenase from Desulfovibrio desulfuricans (strain Norway 4)
Eur. J. Biochem.
145
637-643
1984
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans Norway 4
Fritz, G.; Griesshaber, D.; Seth, O.; Kroneck, P.M.
Nonaheme cytochrome c, a new physiological electron acceptor for [Ni,Fe] hydrogenase in the sulfate-reducing bacterium Desulfovibrio desulfuricans Essex: primary sequence, molecular parameters, and redox properties
Biochemistry
40
1317-1324
2001
Desulfovibrio desulfuricans, Desulfovibrio desulfuricans Essex
Gogotov, I.N.
Hydrogenase of purple bacteria: properties and regulation of synthesis
Arch. Microbiol.
140
86-90
1984
Thiocapsa roseopersicina, Thiocapsa roseopersicina Bbs
-
Adams, M.W.W.; Hall, D.O.
Solubilization and partial purification of the membrane-bound hydrogenase of Escherichia coli
Biochem. Soc. Trans.
6
1339-1341
1978
Escherichia coli
Aubert, C.; Brugna, M.; Dolla, A.; Bruschi, M.; Giudici-Orticoni, M.T.
A sequential electron transfer from hydrogenases to cytochromes in sulfate-reducing bacteria
Biochim. Biophys. Acta
1476
85-92
2000
BRENDA: Desulfomicrobium norvegicum, Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Textmining: Electron
De Luca, G.; De Philip, P.; Dermoun, Z.; Rousset, M.; Vermegljo, A.
Reduction of technetium(VII) by Desulfovibrio fructosovorans is mediated by the nickel-iron hydrogenase
Appl. Environ. Microbiol.
67
4583-4587
2001
Solidesulfovibrio fructosivorans
Eng, L.H.; Lewin, M.B.M.; Neujahr, H.Y.
Kinetic properties of the periplasmic hydrogenase from Desulfovibrio desulfuricans NCIMB 8372 and use in photosensitized hydrogen-production
J. Chem. Technol. Biotechnol.
56
317-324
1993
Desulfovibrio desulfuricans
-
Higuchi, Y.; Yagi, T.
Liberation of hydrogen sulfide during the catalytic action of Desulfovibrio hydrogenase under the atmosphere of hydrogen
Biochem. Biophys. Res. Commun.
255
295-299
1999
BRENDA: Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki
Textmining: Desulfovibrio
Zöphel, A.; Kennedy, M.C.; Beinert, H.; Kroneck, P.M.H.
Investigations on microbial sulfur respiration. Isolation, purification, and characterization of cellular components from Spirillum 5175
Eur. J. Biochem.
195
849-856
1991
Electron
Burgdorf, T.; De Lacey, A.L.; Friedrich, B.
Functional analysis by site-directed mutagenesis of the NAD+-reducing hydrogenase from Ralstonia eutropha
J. Bacteriol.
184
6280-6288
2002
Cupriavidus necator
Fauque, G.; Czechowski, M.; Berlier, Y.M.; Lespinat, P.A.; LeGall, J.; Moura, J.J.G.
Partial purification and characterization of the first hydrogenase isolated from a thermophilic sulfate-reducing bacterium
Biochem. Biophys. Res. Commun.
184
1256-1260
1992
bacterium, Thermodesulfobacterium thermophilum
Foerster, S.; Stein, M.; Brecht, M.; Ogata, H.; Higuchi, Y.; Lubitz, W.
Single crystal EPR studies of the reduced active site of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F
J. Am. Chem. Soc.
125
83-93
2003
Desulfovibrio vulgaris str. 'Miyazaki F'
Hatchikian, E.C.; Forget, N.; Bernadac, A.; Alazard, D.; Ollivier, B.
Involvement of a single periplasmic hydrogenase for both hydrogen uptake and production in some Desulfovibrio species
Res. Microbiol.
146
129-141
1995
Desulfovibrio vulgaris Groningen, Desulfovibrio vulgaris, Electron
Hatchikian, E.C.; Forget, N.; Fernandez, V.M.; Williams, R.; Cammack, R.
Further characterization of the [iron]-hydrogenase from Desulfovibrio desulfuricans ATCC 7757
Eur. J. Biochem.
209
357-365
1992
Desulfovibrio desulfuricans, Desulfovibrio vulgaris str. Hildenborough
Meuer, J.; Bartoschek, S.; Koch, J.; Kunkel, A.; Hedderich, R.
Purification and catalytic properties of Ech hydrogenase from Methanosarcina barkeri
Eur. J. Biochem.
265
325-335
1999
Methanosarcina barkeri
Garcin, E.; Vernede, X.; Hatchikian, E.C.; Volbeda, A.; Frey, M.; Fontecilla-Camps, J.C.
The crystal structure of a reduced [NiFeSe] hydrogenase provides an image of the activated catalytic center
Structure
7
557-566
1999
Desulfomicrobium baculatum
Romao, C.V.; Pereira, I.A.; Xavier, A.V.; LeGall, J.; Teixeira, M.
Characterization of the [NiFe] hydrogenase from the sulfate reducer Desulfovibrio vulgaris Hildenborough
Biochem. Biophys. Res. Commun.
240
75-79
1997
Desulfovibrio vulgaris str. Hildenborough
Malki, S.; De Luca, G.; Fardeau, M.L.; Rousset, M.; Belaich, J.P.; Dermoun, Z.
Physiological characteristics and growth behavior of single and double hydrogenase mutants of Desulfovibrio fructosovorans
Arch. Microbiol.
167
38-45
1997
Desulfovibrio fructosivorans
Malki, S.; Saimmaime, I.; De Luca, G.; Rousset, M.; Dermoun, Z.; Belaich, J.P.
Characterization of an operon encoding an NADP-reducing hydrogenase in Desulfovibrio fructosovorans
J. Bacteriol.
177
2628-2636
1995
Desulfovibrio fructosivorans, Desulfovibrio vulgaris str. Hildenborough
Happe, R.P.; Roseboom, W.; Egert, G.; Friedrich, C.G.; Massanz, C.; Friedrich, B.; Albracht, S.P.
Unusual FTIR and EPR properties of the H2-activating site of the cytoplasmic NAD-reducing hydrogenase from Ralstonia eutropha
FEBS Lett.
466
259-263
2000
Cupriavidus necator, Alcaligenes
Porthun, A.; Bernhard, M.; Friedrich, B.
Expression of a functional NAD-reducing [NiFe] hydrogenase from the gram-positive Rhodococcus opacus in the gram-negative Ralstonia eutropha
Arch. Microbiol.
177
159-166
2002
Rhodococcus opacus, Cupriavidus necator, Rhodococcus opacus MR11
Payne, R.B.; Gentry, D.M.; Rapp-Giles, B.J.; Casalot, L.; Wall, J.D.
Uranium reduction by Desulfovibrio desulfuricans strain G20 and a cytochrome c3 mutant
Appl. Environ. Microbiol.
68
3129-3132
2002
Desulfovibrio desulfuricans, Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Guiral, M.; Leroy, G.; Bianco, P.; Gallice, P.; Guigliarelli, B.; Bruschi, M.; Nitschke, W.; Giudici-Orticoni, M.T.
Interaction and electron transfer between the high molecular weight cytochrome and cytochrome c3 from Desulfovibrio vulgaris Hildenborough: kinetic, microcalorimetric, EPR and electrochemical studies
Biochim. Biophys. Acta
1723
45-54
2005
BRENDA: Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Textmining: Electron
Leul, M.; Mohapatra, A.; Sellstedt, A.
Biodiversity of hydrogenases in Frankia
Curr. Microbiol.
50
17-23
2005
Frankia
Soboh, B.; Linder, D.; Hedderich, R.
Purification and catalytic properties of a CO-oxidizing:H2-evolving enzyme complex from Carboxydothermus hydrogenoformans
Eur. J. Biochem.
269
5712-5721
2002
Electron
ElAntak, L.; Morelli, X.; Bornet, O.; Hatchikian, C.; Czjzek, M.; Dolla, A.; Guerlesquin, F.
The cytochrome c3-[Fe]-hydrogenase electron-transfer complex: structural model by NMR restrained docking
FEBS Lett.
548
1-4
2003
BRENDA: Desulfovibrio desulfuricans
Textmining: Desulfovibrio vulgaris str. Hildenborough, Bacteria, Electron
Van der Linden, E.; Burgdorf, T.; Bernhard, M.; Bleijlevens, B.; Friedrich, B.; Albracht, S.P.
The soluble [NiFe]-hydrogenase from Ralstonia eutropha contains four cyanides in its active site, one of which is responsible for the insensitivity towards oxygen
J. Biol. Inorg. Chem.
9
616-626
2004
Cupriavidus necator
Soboh, B.; Linder, D.; Hedderich, R.
A multisubunit membrane-bound [NiFe] hydrogenase and an NADH-dependent Fe-only hydrogenase in the fermenting bacterium Thermoanaerobacter tengcongensis
Microbiology
150
2451-2463
2004
bacterium, Caldanaerobacter subterraneus subsp. tengcongensis, Methanosarcina barkeri
Bento, I.; Matias, P.M.; Baptista, A.M.; da Costa, P.N.; van Dongen, W.M.; Saraiva, L.M.; Schneider, T.R.; Soares, C.M.; Carrondo, M.A.
Molecular basis for redox-Bohr and cooperative effects in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies of oxidized and reduced high-resolution structures at pH 7.6
Proteins
54
135-152
2004
Desulfovibrio desulfuricans
Chardin, B.; Giudici-Orticoni, M.T.; De Luca, G.; Guigliarelli, B.; Bruschi, M.
Hydrogenases in sulfate-reducing bacteria function as chromate reductase
Appl. Microbiol. Biotechnol.
63
315-321
2003
Desulfovibrio vulgaris
Rodrigues, R.; Valente, F.M.A.; Pereira, I.A.C.; Oliveira, S.; Rodrigues-Pousada, C.
A novel membrane-bound Ech [NiFe] hydrogenase in Desulfovibrio gigas
Biochem. Biophys. Res. Commun.
306
366-375
2003
Desulfovibrio gigas
Mishra, J.; Khurana, S.; Kumar, N.; Ghosh, A.K.; Das, D.
Molecular cloning, characterization, and overexpression of a novel [Fe]-hydrogenase isolated from a high rate of hydrogen producing Enterobacter cloacae IIT-BT 08
Biochem. Biophys. Res. Commun.
324
679-685
2004
Enterobacter cloacae IIT-BT 08, Bacteria
George, S.J.; Kurkin, S.; Thorneley, R.N.; Albracht, S.P.
Reactions of H2, CO, and O2 with active [NiFe]-hydrogenase from Allochromatium vinosum. A stopped-flow infrared study
Biochemistry
43
6808-6819
2004
Allochromatium vinosum
Jones, A.K.; Lamle, S.E.; Pershad, H.R.; Vincent, K.A.; Albracht, S.P.; Armstrong, F.A.
Enzyme electrokinetics: electrochemical studies of the anaerobic interconversions between active and inactive states of Allochromatium vinosum [NiFe]-hydrogenase
J. Am. Chem. Soc.
125
8505-8514
2003
Allochromatium vinosum
Lamle, S.E.; Albracht, S.P.; Armstrong, F.A.
The mechanism of activation of a [NiFe]-hydrogenase by electrons, hydrogen, and carbon monoxide
J. Am. Chem. Soc.
127
6595-6604
2005
Allochromatium vinosum
Dementin, S.; Burlat, B.; De Lacey, A.L.; Pardo, A.; Adryanczyk-Perrier, G.; Guigliarelli, B.; Fernandez, V.M.; Rousset, M.
A Glutamate is the essential proton transfer gate during the catalytic cycle of the [NiFe] hydrogenase
J. Biol. Chem.
279
10508-10513
2004
Desulfovibrio fructosivorans
Agrawal, A.G.; Voordouw, G.; Gaertner, W.
Sequential and structural analysis of [NiFe]-hydrogenase-maturation proteins from Desulfovibrio vulgaris Miyazaki F
Antonie van Leeuwenhoek
90
281-290
2006
Desulfovibrio vulgaris str. 'Miyazaki F'
Pereira, P.M.; Teixeira, M.; Xavier, A.V.; Louro, R.O.; Pereira, I.A.
The Tmc complex from Desulfovibrio vulgaris hildenborough is involved in transmembrane electron transfer from periplasmic hydrogen oxidation
Biochemistry
45
10359-10367
2006
Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Yahata, N.; Saitoh, T.; Takayama, Y.; Ozawa, K.; Ogata, H.; Higuchi, Y.; Akutsu, H.
Redox interaction of cytochrome c3 with [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F
Biochemistry
45
1653-1662
2006
BRENDA: Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki F
Textmining: Desulfovibrio vulgaris str. 'Miyazaki F', Electron
Vignais, P.M.
H/D exchange reactions and mechanistic aspects of the hydrogenases
Coord. Chem. Rev.
249
1677-1690
2005
Desulfovibrio vulgaris, Desulfovibrio vulgaris Miyazaki
-
Buhrke, T.; Lenz, O.; Krauss, N.; Friedrich, B.
Oxygen tolerance of the H2-sensing [NiFe] hydrogenase from Ralstonia eutropha H16 is based on limited access of oxygen to the active site
J. Biol. Chem.
280
23791-23796
2005
Cupriavidus necator H16
Valente, F.M.; Oliveira, A.S.; Gnadt, N.; Pacheco, I.; Coelho, A.V.; Xavier, A.V.; Teixeira, M.; Soares, C.M.; Pereira, I.A.
Hydrogenases in Desulfovibrio vulgaris Hildenborough: structural and physiologic characterisation of the membrane-bound [NiFeSe] hydrogenase
J. Biol. Inorg. Chem.
10
667-682
2005
BRENDA: Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Textmining: Desulfovibrio vulgaris str. Hildenborough, Desulfomicrobium baculatum, Electron
van der Linden, E.; Burgdorf, T.; de Lacey, A.L.; Buhrke, T.; Scholte, M.; Fernandez, V.M.; Friedrich, B.; Albracht, S.P.
An improved purification procedure for the soluble [NiFe]-hydrogenase of Ralstonia eutropha: new insights into its (in)stability and spectroscopic properties
J. Biol. Inorg. Chem.
11
247-260
2006
Cupriavidus necator
Schroeder, O.; Bleijlevens, B.; de Jongh, T.E.; Chen, Z.; Li, T.; Fischer, J.; Foerster, J.; Friedrich, C.G.; Bagley, K.A.; Albracht, S.P.; Lubitz, W.
Characterization of a cyanobacterial-like uptake [NiFe] hydrogenase: EPR and FTIR spectroscopic studies of the enzyme from Acidithiobacillus ferrooxidans
J. Biol. Inorg. Chem.
12
212-233
2007
Acidithiobacillus ferrooxidans
Long, M.; Liu, J.; Chen, Z.; Bleijlevens, B.; Roseboom, W.; Albracht, S.P.
Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module
J. Biol. Inorg. Chem.
12
62-78
2007
Allochromatium vinosum, Thermus thermophilus, Clostridium pasteurianum
Kutty, R.; Bennett, G.N.
Studies on inhibition of transformation of 2,4,6-trinitrotoluene catalyzed by Fe-only hydrogenase from Clostridium acetobutylicum
J. Ind. Microbiol. Biotechnol.
33
368-376
2006
Clostridium acetobutylicum, Transformation, Clostridium acetobutylicum ATCC 824
Pieulle, L.; Morelli, X.; Gallice, P.; Lojou, E.; Barbier, P.; Czjzek, M.; Bianco, P.; Guerlesquin, F.; Hatchikian, E.C.
The type I/type II cytochrome c3 complex: an electron transfer link in the hydrogen-sulfate reduction pathway
J. Mol. Biol.
354
73-90
2005
Desulfocurvibacter africanus
Agrawal, A.G.; van Gastel, M.; Gaertner, W.; Lubitz, W.
Hydrogen bonding affects the [NiFe] active site of Desulfovibrio vulgaris Miyazaki F hydrogenase: a hyperfine sublevel correlation spectroscopy and density functional theory study
J. Phys. Chem. B
110
8142-8150
2006
Desulfovibrio vulgaris str. 'Miyazaki F', Electron
Zhang, J.W.; Leach, M.R.; Zamble, D.B.
The peptidyl-prolyl isomerase activity of SlyD is not required for maturation of Escherichia coli hydrogenase
J. Bacteriol.
189
7942-7944
2007
Escherichia coli
Yang, F.; Hu, W.; Xu, H.; Li, C.; Xia, B.; Jin, C.
Solution structure and backbone dynamics of an endopeptidase HycI from Escherichia coli: implications for mechanism of the [NiFe] hydrogenase maturation
J. Biol. Chem.
282
3856-3863
2007
Escherichia coli, Escherichia coli (P0AEV9)
Arai, T.; Watanabe, S.; Matsumi, R.; Atomi, H.; Imanaka, T.; Miki, K.
Crystallization and preliminary X-ray crystallographic study of [NiFe]-hydrogenase maturation factor HypE from Thermococcus kodakaraensis KOD1
Acta Crystallogr. Sect. F
63
765-767
2007
Thermococcus kodakarensis KOD1
Kellers, P.; Ogata, H.; Lubitz, W.
Purification, crystallization and preliminary X-ray analysis of the membrane-bound [NiFe] hydrogenase from Allochromatium vinosum
Acta Crystallogr. Sect. F
64
719-722
2008
Allochromatium vinosum, bacterium
Park, H.S.; Lin, S.; Voordouw, G.
Ferric iron reduction by Desulfovibrio vulgaris Hildenborough wild type and energy metabolism mutants
Antonie van Leeuwenhoek
93
79-85
2007
BRENDA: Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Textmining: Desulfovibrio vulgaris str. Hildenborough, Electron
Hong, Y.G.; Guo, J.; Sun, G.P.
Identification of an uptake hydrogenase for hydrogen-dependent dissimilatory azoreduction by Shewanella decolorationis S12
Appl. Microbiol. Biotechnol.
80
517-524
2008
Shewanella decolorationis
Long, H.; Chang, C.H.; King, P.W.; Ghirardi, M.L.; Kim, K.
Brownian dynamics and molecular dynamics study of the association between hydrogenase and ferredoxin from Chlamydomonas reinhardtii
Biophys. J.
95
3753-3766
2008
Chlamydomonas reinhardtii
Marshall, M.J.; Plymale, A.E.; Kennedy, D.W.; Shi, L.; Wang, Z.; Reed, S.B.; Dohnalkova, A.C.; Simonson, C.J.; Liu, C.; Saffarini, D.A.; Romine, M.F.; Zachara, J.M.; Beliaev, A.S.; Fredrickson, J.K.
Hydrogenase- and outer membrane c-type cytochrome-facilitated reduction of technetium(VII) by Shewanella oneidensis MR-1
Environ. Microbiol.
10
125-136
2008
Shewanella oneidensis, Shewanella oneidensis MR-1 / ATCC 700550
Forzi, L.; Hellwig, P.; Thauer, R.K.; Sawers, R.G.
The CO and CN(-) ligands to the active site Fe in [NiFe]-hydrogenase of Escherichia coli have different metabolic origins
FEBS Lett.
581
3317-3321
2007
Escherichia coli
Lenz, O.; Zebger, I.; Hamann, J.; Hildebrandt, P.; Friedrich, B.
Carbamoylphosphate serves as the source of CN(-), but not of the intrinsic CO in the active site of the regulatory [NiFe]-hydrogenase from Ralstonia eutropha
FEBS Lett.
581
3322-3326
2007
Cupriavidus necator, Escherichia coli, Cupriavidus necator H16
Valente, F.M.; Pereira, P.M.; Venceslau, S.S.; Regalla, M.; Coelho, A.V.; Pereira, I.A.
The [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough is a bacterial lipoprotein lacking a typical lipoprotein signal peptide
FEBS Lett.
581
3341-3344
2007
BRENDA: Desulfovibrio vulgaris, Desulfovibrio vulgaris Hildenborough
Textmining: Desulfovibrio vulgaris str. Hildenborough
Rangarajan, E.S.; Asinas, A.; Proteau, A.; Munger, C.; Baardsnes, J.; Iannuzzi, P.; Matte, A.; Cygler, M.
Structure of [NiFe] hydrogenase maturation protein HypE from Escherichia coli and its interaction with HypF
J. Bacteriol.
190
1447-1458
2008
Escherichia coli
Vogt, S.; Lyon, E.J.; Shima, S.; Thauer, R.K.
The exchange activities of [Fe] hydrogenase (iron-sulfur-cluster-free hydrogenase) from methanogenic archaea in comparison with the exchange activities of [FeFe] and [NiFe] hydrogenases
J. Biol. Inorg. Chem.
13
97-106
2008
Archaea, Escherichia coli, Electron
Iida, S.; Asakura, N.; Tabata, K.; Okura, I.; Kamachi, T.
Role of positive charge of lysine residue on cytochrome c3 for electrostatic interaction with hydrogenase
J. Porphyr. Phthalocyanines
11
66-73
2007
Desulfovibrio vulgaris
-
Watanabe, S.; Matsumi, R.; Arai, T.; Atomi, H.; Imanaka, T.; Miki, K.
Crystal structures of [NiFe] hydrogenase maturation proteins HypC, HypD, and HypE: insights into cyanation reaction by thiol redox signaling
Mol. Cell
27
29-40
2007
insertion sequences
Teixeira, V.H.; Soares, C.M.; Baptista, A.M.
Proton pathways in a [NiFe]-hydrogenase: A theoretical study
Proteins
70
1010-1022
2008
BRENDA: Megalodesulfovibrio gigas
Textmining: Desulfovibrio gigas
Fdez Galvan, I.; Volbeda, A.; Fontecilla-Camps, J.C.; Field, M.J.
A QM/MM study of proton transport pathways in a [NiFe] hydrogenase
Proteins
73
195-203
2008
Desulfovibrio fructosivorans
Maltempi de Souza, E.; de Oliveira Pedrosa, F.; Wassem, R.; Ford, C.M.; Yates, M.G.
Genes involved in Sec-independent membrane targeting of hydrogenase in Azotobacter chroococcum
Res. Microbiol.
158
272-278
2007
Azotobacter chroococcum, Azotobacter chroococcum MCD1
Marques, M.; Coelho, R.; Pereira, I.A.; Matias, P.M.
Purification, crystallization and preliminary crystallographic analysis of the [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough
Acta Crystallogr. Sect. F
65
920-922
2009
Desulfovibrio vulgaris str. Hildenborough
Rashamuse, K.; Mutambanengwe, C.; Whiteley, C.
Enzymatic recovery of platinum (IV) from industrial wastewater using a biosulphidogenic hydrogenase
Afr. J. Biotechnol.
7
1087-1095
2008
Bacteria
-
Xing, D.; Ren, N.; Rittmann, B.
Genetic diversity of hydrogen-producing bacteria in an acidophilic ethanol-H2-coproducing system, analyzed using the [Fe]-hydrogenase gene
Appl. Environ. Microbiol.
74
1232-1239
2008
Bacteria
Caffrey, S.M.; Park, H.S.; Been, J.; Gordon, P.; Sensen, C.W.; Voordouw, G.
Gene expression by the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough grown on an iron electrode under cathodic protection conditions
Appl. Environ. Microbiol.
74
2404-2413
2008
Desulfovibrio vulgaris str. Hildenborough (Q06173), Desulfovibrio vulgaris str. Hildenborough
Dias, A.V.; Mulvihill, C.M.; Leach, M.R.; Pickering, I.J.; George, G.N.; Zamble, D.B.
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Glycine max, Bradyrhizobium japonicum, Electron
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Desulfovibrio vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris Miyazaki, Electron
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Chromatium, Desulfovibrio, Desulfovibrio vulgaris, Desulfovibrio vulgaris str. 'Miyazaki F', Electron
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Desulfovibrio vulgaris Miyazaki, Desulfovibrio, Desulfovibrio desulfuricans, Desulfovibrio vulgaris, Desulfovibrio vulgaris str. Hildenborough, Oryctolagus cuniculus
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Rhizobium leguminosarum, Pisum sativum
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Azotobacter chroococcum, Bacteria, Cupriavidus necator, Escherichia coli, Rhizobium leguminosarum, Rhodobacter capsulatus
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Pisum sativum, Rhizobium leguminosarum bv. viciae UPM791
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Desulfovibrio, Clostridium
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Rhodobacter capsulatus, Electron, bacterium
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Desulfovibrio, Desulfovibrio gigas, Dosidicus gigas
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Desulfovibrio vulgaris str. 'Miyazaki F', Electron
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Clostridium paraputrificum M-21, Escherichia coli
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Chlamydomonas reinhardtii
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Aquifex aeolicus, bacterium, Desulfovibrio fructosivorans
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Desulfovibrio vulgaris str. Hildenborough
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Electron
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Escherichia coli, Hydrogenovibrio marinus
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Aquifex aeolicus, bacterium
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Desulfomicrobium baculatum, Bacteria
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Desulfovibrio vulgaris str. 'Miyazaki F', Desulfovibrio gigas, Desulfovibrio vulgaris str. Hildenborough
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Desulfovibrio vulgaris, Cupidesulfovibrio oxamicus
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Desulfovibrio gigas
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Desulfovibrio
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Azotobacter vinelandii
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1993
Desulfovibrio desulfuricans
Rousset, M; Dermoun, Z; Wall, JD; Belaich, JP
Analysis of the periplasmic [NiFe] hydrogenase transcription unit from Desulfovibrio fructosovorans.
J Bacteriol
175
3388-93
1993
Desulfovibrio fructosivorans
Sorgenfrei, O; Linder, D; Karas, M; Klein, A
A novel very small subunit of a selenium containing [NiFe] hydrogenase of Methanococcus voltae is postranslationally processed by cleavage at a defined position.
Eur J Biochem
213
1355-8
1993
Methanococcus voltae
Wawer, C; Jetten, MS; Muyzer, G
Genetic diversity and expression of the [NiFe] hydrogenase large-subunit gene of Desulfovibrio spp. in environmental samples.
Appl Environ Microbiol
63
4360-9
1997
Desulfovibrio
Rousset, M; Magro, V; Forget, N; Guigliarelli, B; Belaich, JP; Hatchikian, EC
Heterologous expression of the Desulfovibrio gigas [NiFe] hydrogenase in Desulfovibrio fructosovorans MR400.
J Bacteriol
180
4982-6
1998
Desulfovibrio fructosivorans, Desulfovibrio gigas, Dosidicus gigas
Rousset, M; Montet, Y; Guigliarelli, B; Forget, N; Asso, M; Bertrand, P; Fontecilla-Camps, JC; Hatchikian, EC
[3Fe-4S] to [4Fe-4S] cluster conversion in Desulfovibrio fructosovorans [NiFe] hydrogenase by site-directed mutagenesis.
Proc Natl Acad Sci U S A
95
11625-30
1998
Desulfovibrio fructosivorans, Desulfovibrio
Pfeiffer, M; Bestgen, H; Bürger, A; Klein, A
The vhuU gene encoding a small subunit of a selenium-containing [NiFe]-hydrogenase in Methanococcus voltae appears to be essential for the cell.
Arch Microbiol
170
418-26
1998
Methanococcus voltae, Escherichia coli
Peters, JW; Lanzilotta, WN; Lemon, BJ; Seefeldt, LC
X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution.
Science
282
1853-8
1998
Clostridium pasteurianum
Brugna, M; Giudici-Orticoni, MT; Spinelli, S; Brown, K; Tegoni, M; Bruschi, M
Kinetics and interaction studies between cytochrome c3 and Fe-only hydrogenase from Desulfovibrio vulgaris Hildenborough.
Proteins
33
590-600
1998
Bacteria, Desulfovibrio vulgaris str. Hildenborough, Electron
Happe, RP; Roseboom, W; Albracht, SP
Pre-steady-state kinetics of the reactions of [NiFe]-hydrogenase from Chromatium vinosum with H2 and CO.
Eur J Biochem
259
602-8
1999
Allochromatium vinosum
Hatchikian, EC; Magro, V; Forget, N; Nicolet, Y; Fontecilla-Camps, JC
Carboxy-terminal processing of the large subunit of [Fe] hydrogenase from Desulfovibrio desulfuricans ATCC 7757.
J Bacteriol
181
2947-52
1999
Desulfovibrio desulfuricans, Desulfovibrio vulgaris str. Hildenborough
Pershad, HR; Duff, JL; Heering, HA; Duin, EC; Albracht, SP; Armstrong, FA
Catalytic electron transport in Chromatium vinosum [NiFe]-hydrogenase: application of voltammetry in detecting redox-active centers and establishing that hydrogen oxidation is very fast even at potentials close to the reversible H+/H2 value.
Biochemistry
38
8992-9
1999
Allochromatium vinosum, Electron
Gessner, C; Stein, M; Albracht, SP; Lubitz, W
Orientation-selected ENDOR of the active center in Chromatium vinosum [NiFe] hydrogenase in the oxidized "ready" state.
J Biol Inorg Chem
4
379-89
1999
Allochromatium vinosum, Electron
Rákhely, G; Zhou, ZH; Adams, MW; Kovács, KL
Biochemical and molecular characterization of the [NiFe] hydrogenase from the hyperthermophilic archaeon, Thermococcus litoralis.
Eur J Biochem
266
1158-65
1999
Thermococcus litoralis, archaeon
Atta, M; Meyer, J
Characterization of the gene encoding the [Fe]-hydrogenase from Megasphaera elsdenii.
Biochim Biophys Acta
1476
368-71
2000
Megasphaera elsdenii, Thermotoga maritima, bacterium
Trofanchuk, O; Stein, M; Gessner, C; Lendzian, F; Higuchi, Y; Lubitz, W
Single crystal EPR studies of the oxidized active site of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.
J Biol Inorg Chem
5
36-44
2000
Desulfovibrio vulgaris str. 'Miyazaki F'
Magalon, A; Böck, A
Dissection of the maturation reactions of the [NiFe] hydrogenase 3 from Escherichia coli taking place after nickel incorporation.
FEBS Lett
473
254-8
2000
Escherichia coli
Higuchi, Y; Toujou, F; Tsukamoto, K; Yagi, T
The presence of a SO molecule in [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki as detected by mass spectrometry.
J Inorg Biochem
80
205-11
2000
Desulfovibrio vulgaris Miyazaki, Desulfovibrio vulgaris str. 'Miyazaki F', Clostridium pasteurianum, Sus scrofa
Matias, PM; Soares, CM; Saraiva, LM; Coelho, R; Morais, J; Le Gall, J; Carrondo, MA
[NiFe] hydrogenase from Desulfovibrio desulfuricans ATCC 27774: gene sequencing, three-dimensional structure determination and refinement at 1.8 A and modelling studies of its interaction with the tetrahaem cytochrome c3.
J Biol Inorg Chem
6
63-81
2001
Desulfovibrio desulfuricans ATCC 27774
Verhagen, MF; O'Rourke, TW; Menon, AL; Adams, MW
Heterologous expression and properties of the gamma-subunit of the Fe-only hydrogenase from Thermotoga maritima.
Biochim Biophys Acta
1505
209-19
2001
bacterium, Thermotoga maritima
Nicolet, Y; de Lacey, AL; Vernède, X; Fernandez, VM; Hatchikian, EC; Fontecilla-Camps, JC
Crystallographic and FTIR spectroscopic evidence of changes in Fe coordination upon reduction of the active site of the Fe-only hydrogenase from Desulfovibrio desulfuricans.
J Am Chem Soc
123
1596-601
2001
Desulfovibrio desulfuricans
Takács, M; Rákhely, G; Kovács, KL
Molecular characterization and heterologous expression of hypCD, the first two [NiFe] hydrogenase accessory genes of Thermococcus litoralis.
Arch Microbiol
176
231-5
2001
Thermococcus litoralis
Bleijlevens, B; Faber, BW; Albracht, SP
The [NiFe] hydrogenase from Allochromatium vinosum studied in EPR-detectable states: H/D exchange experiments that yield new information about the structure of the active site.
J Biol Inorg Chem
6
763-9
2001
Allochromatium vinosum
Buhrke, T; Bleijlevens, B; Albracht, SP; Friedrich, B
Involvement of hyp gene products in maturation of the H(2)-sensing [NiFe] hydrogenase of Ralstonia eutropha.
J Bacteriol
183
7087-93
2001
Cupriavidus necator
Pohorelic, BK; Voordouw, JK; Lojou, E; Dolla, A; Harder, J; Voordouw, G
Effects of deletion of genes encoding Fe-only hydrogenase of Desulfovibrio vulgaris Hildenborough on hydrogen and lactate metabolism.
J Bacteriol
184
679-86
2002
Desulfovibrio vulgaris str. Hildenborough, Electron
Chen, Z; Lemon, BJ; Huang, S; Swartz, DJ; Peters, JW; Bagley, KA
Infrared studies of the CO-inhibited form of the Fe-only hydrogenase from Clostridium pasteurianum I: examination of its light sensitivity at cryogenic temperatures.
Biochemistry
41
2036-43
2002
Clostridium pasteurianum
Voncken, FG; Boxma, B; van Hoek, AH; Akhmanova, AS; Vogels, GD; Huynen, M; Veenhuis, M; Hackstein, JH
A hydrogenosomal [Fe]-hydrogenase from the anaerobic chytrid Neocallimastix sp. L2.
Gene
284
103-12
2002
Neocallimastix
Winkler, M; Heil, B; Heil, B; Happe, T
Isolation and molecular characterization of the [Fe]-hydrogenase from the unicellular green alga Chlorella fusca.
Biochim Biophys Acta
1576
330-4
2002
[Chlorella] fusca
Davidson, EA; van der Giezen, M; Horner, DS; Embley, TM; Howe, CJ
An [Fe] hydrogenase from the anaerobic hydrogenosome-containing fungus Neocallimastix frontalis L2.
Gene
296
45-52
2002
Neocallimastix frontalis L2, Neocallimastix, Neocallimastix frontalis, Stenotrophomonas nitritireducens
Léger, C; Jones, AK; Roseboom, W; Albracht, SP; Armstrong, FA
Enzyme electrokinetics: hydrogen evolution and oxidation by Allochromatium vinosum [NiFe]-hydrogenase.
Biochemistry
41
15736-46
2002
Allochromatium vinosum
Watrous, MM; Clark, S; Kutty, R; Huang, S; Rudolph, FB; Hughes, JB; Bennett, GN
2,4,6-trinitrotoluene reduction by an Fe-only hydrogenase in Clostridium acetobutylicum.
Appl Environ Microbiol
69
1542-7
2003
Clostridium acetobutylicum
Haumann, M; Porthun, A; Buhrke, T; Liebisch, P; Meyer-Klaucke, W; Friedrich, B; Dau, H
Hydrogen-induced structural changes at the nickel site of the regulatory [NiFe] hydrogenase from Ralstonia eutropha detected by X-ray absorption spectroscopy.
Biochemistry
42
11004-15
2003
Cupriavidus necator
Fournier, M; Dermoun, Z; Durand, MC; Dolla, A
A new function of the Desulfovibrio vulgaris Hildenborough [Fe] hydrogenase in the protection against oxidative stress.
J Biol Chem
279
1787-93
2004
Desulfovibrio vulgaris str. Hildenborough
Zhou, T; Mo, Y; Liu, A; Zhou, Z; Tsai, KR
Enzymatic mechanism of Fe-only hydrogenase: density functional study on H-H making/breaking at the diiron cluster with concerted proton and electron transfers.
Inorg Chem
43
923-30
2004
Electron
Buhrke, T; Lenz, O; Porthun, A; Friedrich, B
The H2-sensing complex of Ralstonia eutropha: interaction between a regulatory [NiFe] hydrogenase and a histidine protein kinase.
Mol Microbiol
51
1677-89
2004
Cupriavidus necator
Kurkin, S; George, SJ; Thorneley, RN; Albracht, SP
Hydrogen-induced activation of the [NiFe]-hydrogenase from Allochromatium vinosum as studied by stopped-flow infrared spectroscopy.
Biochemistry
43
6820-31
2004
Allochromatium vinosum
Bleijlevens, B; van Broekhuizen, FA; De Lacey, AL; Roseboom, W; Fernandez, VM; Albracht, SP
The activation of the [NiFe]-hydrogenase from Allochromatium vinosum. An infrared spectro-electrochemical study.
J Biol Inorg Chem
9
743-52
2004
Allochromatium vinosum
Lamle, SE; Albracht, SP; Armstrong, FA
Electrochemical potential-step investigations of the aerobic interconversions of [NiFe]-hydrogenase from Allochromatium vinosum: insights into the puzzling difference between unready and ready oxidized inactive states.
J Am Chem Soc
126
14899-909
2004
Allochromatium vinosum
van Gastel, M; Fichtner, C; Neese, F; Lubitz, W
EPR experiments to elucidate the structure of the ready and unready states of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F.
Biochem Soc Trans
33
7-11
2005
Desulfovibrio vulgaris str. 'Miyazaki F'
Goenka, A; Voordouw, JK; Lubitz, W; Gärtner, W; Voordouw, G
Construction of a [NiFe]-hydrogenase deletion mutant of Desulfovibrio vulgaris Hildenborough.
Biochem Soc Trans
33
59-60
2005
Desulfovibrio vulgaris str. Hildenborough
Palacios, JM; Manyani, H; MartÃnez, M; Ureta, AC; Brito, B; Báscones, E; Rey, L; Imperial, J; Ruiz-Argüeso, T
Genetics and biotechnology of the H(2)-uptake [NiFe] hydrogenase from Rhizobium leguminosarum bv. viciae, a legume endosymbiotic bacterium.
Biochem Soc Trans
33
94-6
2005
bacterium, Rhizobium leguminosarum bv. viciae
Tye, JW; Lee, J; Wang, HW; Mejia-Rodriguez, R; Reibenspies, JH; Hall, MB; Darensbourg, MY
Dual electron uptake by simultaneous iron and ligand reduction in an N-heterocyclic carbene substituted [FeFe] hydrogenase model compound.
Inorg Chem
44
5550-2
2005
Electron
Manyani, H; Rey, L; Palacios, JM; Imperial, J; Ruiz-Argüeso, T
Gene products of the hupGHIJ operon are involved in maturation of the iron-sulfur subunit of the [NiFe] hydrogenase from Rhizobium leguminosarum bv. viciae.
J Bacteriol
187
7018-26
2005
Rhizobium leguminosarum
van Gastel, M; Stein, M; Brecht, M; Schröder, O; Lendzian, F; Bittl, R; Ogata, H; Higuchi, Y; Lubitz, W
A single-crystal ENDOR and density functional theory study of the oxidized states of the [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.
J Biol Inorg Chem
11
41-51
2006
Desulfovibrio vulgaris str. 'Miyazaki F', Electron
Bryant, RD; Van Ommen Kloeke, F; Laishley, EJ
Regulation of the Periplasmic [Fe] Hydrogenase by Ferrous Iron in Desulfovibrio vulgaris (Hildenborough).
Appl Environ Microbiol
59
491-495
1993
Desulfovibrio vulgaris, bacterium
Kutty, R; Bennett, GN
Studies on inhibition of transformation of 2,4,6-trinitrotoluene catalyzed by Fe-only hydrogenase from Clostridium acetobutylicum.
J Ind Microbiol Biotechnol
1-9
2006
Clostridium acetobutylicum, Transformation, Clostridium acetobutylicum ATCC 824
King, PW; Posewitz, MC; Ghirardi, ML; Seibert, M
Functional Studies of [FeFe] Hydrogenase Maturation in an Escherichia coli Biosynthetic System.
J Bacteriol
188
2163-72
2006
Escherichia coli, Clostridium acetobutylicum, Chlamydomonas reinhardtii, bacterium
Ihara, M; Nakamoto, H; Kamachi, T; Okura, I; Maeda, M
Photoinduced hydrogen production by direct electron transfer from photosystem I cross-linked with cytochrome c3 to [NiFe]-hydrogenase.
Photochem Photobiol
82
1677-85
0
Electron
Fichtner, C; Laurich, C; Bothe, E; Lubitz, W
Spectroelectrochemical characterization of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F.
Biochemistry
45
9706-16
2006
Desulfovibrio vulgaris str. 'Miyazaki F'
Boxma, B; Ricard, G; van Hoek, AH; Severing, E; Moon-van der Staay, SY; van der Staay, GW; van Alen, TA; de Graaf, RM; Cremers, G; Kwantes, M; McEwan, NR; Newbold, CJ; Jouany, JP; Michalowski, T; Pristas, P; Huynen, MA; Hackstein, JH
The [FeFe] hydrogenase of Nyctotherus ovalis has a chimeric origin.
BMC Evol Biol
7
230
2007
Nyctotherus ovalis
Flores, M; Agrawal, AG; van Gastel, M; Gärtner, W; Lubitz, W
Electron-electron double resonance-detected NMR to measure metal hyperfine interactions: 61Ni in the Ni-B state of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F.
J Am Chem Soc
130
2402-3
2008
Desulfovibrio vulgaris str. 'Miyazaki F'
Silakov, A; Wenk, B; Reijerse, E; Albracht, SP; Lubitz, W
Spin distribution of the H-cluster in the H(ox)-CO state of the [FeFe] hydrogenase from Desulfovibrio desulfuricans: HYSCORE and ENDOR study of (14)N and (13)C nuclear interactions.
J Biol Inorg Chem
14
301-13
2009
Desulfovibrio desulfuricans
Maróti, G; Tong, Y; Yooseph, S; Baden-Tillson, H; Smith, HO; Kovács, KL; Frazier, M; Venter, JC; Xu, Q
Discovery of [NiFe] hydrogenase genes in metagenomic DNA: cloning and heterologous expression in Thiocapsa roseopersicina.
Appl Environ Microbiol
75
5821-30
2009
Thiocapsa roseopersicina
Millo, D; Pandelia, ME; Utesch, T; Wisitruangsakul, N; Mroginski, MA; Lubitz, W; Hildebrandt, P; Zebger, I
Spectroelectrochemical Study of the [NiFe] Hydrogenase from Desulfovibrio vulgaris Miyazaki F in Solution and Immobilized on Biocompatible Gold Surfaces.
J Phys Chem B
2009
Desulfovibrio vulgaris str. 'Miyazaki F'
Pandelia, ME; Ogata, H; Currell, LJ; Flores, M; Lubitz, W
Inhibition of the [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F by carbon monoxide: an FTIR and EPR spectroscopic study.
Biochim Biophys Acta
1797
304-13
2010
Desulfovibrio vulgaris str. 'Miyazaki F'
Winter, G; Dökel, S; Jones, AK; Scheerer, P; Krauss, N; Höhne, W; Friedrich, B
Crystallization and preliminary X-ray crystallographic analysis of the [NiFe]-hydrogenase maturation factor HypF1 from Ralstonia eutropha H16.
Acta Crystallogr Sect F Struct Biol Cryst Commun
66
452-5
2010
Cupriavidus necator H16
Kellers, P; Pandelia, ME; Currell, LJ; Görner, H; Lubitz, W
FTIR study on the light sensitivity of the [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F: Ni-C to Ni-L photoconversion, kinetics of proton rebinding and H/D isotope effect.
Phys Chem Chem Phys
11
8680-3
2009
Desulfovibrio vulgaris str. 'Miyazaki F'
Liu, YC; Tu, LK; Yen, TH; Lee, GH; Yang, ST; Chiang, MH
Secondary coordination sphere interactions within the biomimetic iron azadithiolate complexes related to Fe-only hydrogenase: dynamic measure of electron density about the Fe sites.
Inorg Chem
49
6409-20
2010
Electron
Kim, JY; Jo, BH; Cha, HJ
Production of biohydrogen by recombinant expression of [NiFe]-hydrogenase 1 in Escherichia coli.
Microb Cell Fact
9
54
2010
Escherichia coli
Ogata, H; Kellers, P; Lubitz, W
The crystal structure of the [NiFe] hydrogenase from the photosynthetic bacterium Allochromatium vinosum: characterization of the oxidized enzyme (Ni-A state).
J Mol Biol
402
428-44
2010
Allochromatium vinosum, bacterium, Desulfovibrio
Silakov, A; Shaw, JL; Reijerse, EJ; Lubitz, W
Advanced Electron Paramagnetic Resonance and Density Functional Theory Study of a {2Fe3S} Cluster Mimicking the Active Site of [FeFe] Hydrogenase.
J Am Chem Soc
2010
Electron
Chung, KC; Zamble, DB
The Escherichia coli metal-binding chaperone SlyD interacts with the large subunit of [NiFe]-hydrogenase 3.
FEBS Lett
585
291-4
2011
Escherichia coli
Wells, MA; Mercer, J; Mott, RA; Pereira-Medrano, AG; Burja, AM; Radianingtyas, H; Wright, PC
Engineering a non-native hydrogen production pathway into Escherichia coli via a cyanobacterial [NiFe] hydrogenase.
Metab Eng
2011
Escherichia coli
Millo, D; Hildebrandt, P; Pandelia, ME; Lubitz, W; Zebger, I
SEIRA Spectroscopy of the Electrochemical Activation of an Immobilized [NiFe] Hydrogenase under Turnover and Non-Turnover Conditions.
Angew Chem Int Ed Engl
50
2632-4
2011
Seira
Shima, S; Schick, M; Tamura, H
Preparation of [fe]-hydrogenase from methanogenic archaea.
Methods Enzymol
494
119-37
2011
Archaea, Methanothermobacter marburgensis
Pandelia, ME; Nitschke, W; Infossi, P; Giudici-Orticoni, MT; Bill, E; Lubitz, W
Characterization of a unique [FeS] cluster in the electron transfer chain of the oxygen tolerant [NiFe] hydrogenase from Aquifex aeolicus.
Proc Natl Acad Sci U S A
2011
Aquifex aeolicus, Electron
Kanai, T; Matsuoka, R; Beppu, H; Nakajima, A; Okada, Y; Atomi, H; Imanaka, T
Distinct physiological roles of the three [NiFe]-hydrogenase orthologs in the hyperthermophilic archaeon Thermococcus kodakarensis.
J Bacteriol
193
3109-16
2011
Thermococcus kodakarensis, archaeon, Thermococcus kodakarensis KOD1
McIntosh, CL; Germer, F; Schulz, R; Appel, J; Jones, AK
The [NiFe]-Hydrogenase of the Cyanobacterium Synechocystis sp. PCC 6803 Works Bidirectionally with a Bias to H(2) Production.
J Am Chem Soc
133
11308-11319
2011
Synechocystis sp.
Weyman, PD; Smith, HO; Xu, Q
Genetic analysis of the Alteromonas macleodii [NiFe]-hydrogenase.
FEMS Microbiol Lett
322
180-7
2011
Alteromonas macleodii
Shi, L; Belchik, SM; Plymale, AE; Heald, S; Dohnalkova, AC; Sybirna, K; Bottin, H; Squier, TC; Zachara, JM; Fredrickson, JK
Purification and Characterization of the [NiFe]-Hydrogenase of Shewanella oneidensis MR-1.
Appl Environ Microbiol
77
5584-90
2011
Shewanella oneidensis MR-1
Constant, P; Chowdhury, SP; Hesse, L; Pratscher, J; Conrad, R
Genome Data Mining and Soil Survey for the Novel Group 5 [NiFe]-Hydrogenase To Explore the Diversity and Ecological Importance of Presumptive High-Affinity H2-Oxidizing Bacteria.
Appl Environ Microbiol
77
6027-35
2011
Bacteria, Streptomyces
Kim, JY; Jo, BH; Cha, HJ
Production of biohydrogen by heterologous expression of oxygen-tolerant Hydrogenovibrio marinus [NiFe]-hydrogenase in Escherichia coli.
J Biotechnol
155
312-9
2011
Escherichia coli, Hydrogenovibrio marinus, Escherichia coli BL21, bacterium
Shomura, Y; Hagiya, K; Yoon, KS; Nishihara, H; Higuchi, Y
Crystallization and preliminary X-ray diffraction analysis of membrane-bound respiratory [NiFe] hydrogenase from Hydrogenovibrio marinus.
Acta Crystallogr Sect F Struct Biol Cryst Commun
67
827-9
2011
Hydrogenovibrio marinus, Bacteria
Ballor, NR; Leadbetter, JR
Analysis of Extensive [FeFe] Hydrogenase Gene Diversity Within the Gut Microbiota of Insects Representing Five Families of Dictyoptera.
Microb Ecol
63
586-95
2012
Blattodea, Dictyoptera, Hexapoda, Microbiota, Termitoidae
Chan Chung, KC; Zamble, DB
Protein interactions and localization of the Escherichia coli accessory protein HypA during nickel insertion to [NiFe] hydrogenase.
J Biol Chem
286
43081-90
2011
Escherichia coli, insertion sequences
Cheng, T; Li, H; Xia, W; Sun, H
Multifaceted SlyD from Helicobacter pylori: implication in [NiFe] hydrogenase maturation.
J Biol Inorg Chem
17
331-43
2012
Helicobacter pylori
Trchounian, K; Pinske, C; Sawers, RG; Trchounian, A
Characterization of Escherichia coli [NiFe]-Hydrogenase Distribution During Fermentative Growth at Different pHs.
Cell Biochem Biophys
2011
Escherichia coli
Zadvornyy, OA; Lucon, JE; Gerlach, R; Zorin, NA; Douglas, T; Elgren, TE; Peters, JW
Photo-induced H2 production by [NiFe]-hydrogenase from T. roseopersicina covalently linked to a Ru(II) photosensitizer.
J Inorg Biochem
106
151-5
2012
Thiocapsa roseopersicina
Pandelia, ME; Infossi, P; Stein, M; Giudici-Orticoni, MT; Lubitz, W
Spectroscopic characterization of the key catalytic intermediate Ni-C in the O2-tolerant [NiFe] hydrogenase I from Aquifex aeolicus: evidence of a weakly bound hydride.
Chem Commun (Camb)
48
823-5
2012
Aquifex aeolicus
Wang, WG; Wang, F; Wang, HY; Tung, CH; Wu, LZ
Electron transfer and hydrogen generation from a molecular dyad: platinum(II) alkynyl complex anchored to [FeFe] hydrogenase subsite mimic.
Dalton Trans
41
2420-6
2012
Electron
Schick, M; Xie, X; Ataka, K; Kahnt, J; Linne, U; Shima, S
Biosynthesis of the iron-guanylylpyridinol cofactor of [fe]-hydrogenase in methanogenic archaea as elucidated by stable-isotope labeling.
J Am Chem Soc
134
3271-80
2012
Archaea
Kaluarachchi, H; Altenstein, M; Sugumar, SR; Balbach, J; Zamble, DB; Haupt, C
Nickel Binding and [NiFe]-Hydrogenase Maturation by the Metallochaperone SlyD with a Single Metal-Binding Site in Escherichia coli.
J Mol Biol
417
28-35
2012
Escherichia coli
Volbeda, A; Amara, P; Darnault, C; Mouesca, JM; Parkin, A; Roessler, MM; Armstrong, FA; Fontecilla-Camps, JC
X-ray crystallographic and computational studies of the O2-tolerant [NiFe]-hydrogenase 1 from Escherichia coli.
Proc Natl Acad Sci U S A
109
5305-10
2012
Escherichia coli
Ballor, NR; Leadbetter, JR
Patterns of [FeFe] hydrogenase diversity in the gut microbial communities of lignocellulose-feeding higher termites.
Appl Environ Microbiol
78
5368-74
2012
Termitidae
Roessler, MM; Evans, RM; Davies, RA; Harmer, J; Armstrong, FA
EPR Spectroscopic Studies of the Fe-S Clusters in the O(2)-Tolerant [NiFe]-Hydrogenase Hyd-1 from Escherichia coli and Characterization of the Unique [4Fe-3S] Cluster by HYSCORE.
J Am Chem Soc
134
15581-94
2012
Escherichia coli
Tominaga, T; Watanabe, S; Matsumi, R; Atomi, H; Imanaka, T; Miki, K
Structure of the [NiFe]-hydrogenase maturation protein HypF from Thermococcus kodakarensis KOD1.
Acta Crystallogr Sect F Struct Biol Cryst Commun
68
1153-7
2012
Thermococcus kodakarensis KOD1
Albareda, M; Manyani, H; Imperial, J; Brito, B; Ruiz-Argüeso, T; Böck, A; Palacios, JM
Dual role of HupF in the biosynthesis of [NiFe] hydrogenase in Rhizobium leguminosarum.
BMC Microbiol
12
256
2012
Rhizobium leguminosarum
Osuka, H; Shomura, Y; Komori, H; Shibata, N; Nagao, S; Higuchi, Y; Hirota, S
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Cupriavidus necator, Cupriavidus necator H16
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Electron, Clostridium pasteurianum
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Alteromonas macleodii, Electron
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Chlamydomonas reinhardtii
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Escherichia coli, Chloroflexi, Dehalococcoides mccartyi
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Appl Environ Microbiol
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J Am Chem Soc
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Escherichia coli, insertion sequences
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J Am Chem Soc
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Appl Microbiol Biotechnol
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Nostoc sp., Clostridium acetobutylicum, Nostoc sp. PCC 7120 = FACHB-418
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Escherichia coli, insertion sequences
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Archaea, Bacteria, Escherichia coli
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Desulfovibrio desulfuricans, Desulfovibrio
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J Am Chem Soc
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Clostridium beijerinckii
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Escherichia coli, Cupriavidus necator H16
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Clostridium acetobutylicum
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Methanocaldococcus
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Desulfovibrio fructosivorans
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Archaea
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Desulfovibrio fructosivorans
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Archaea, insertion sequences
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Cupriavidus necator
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Cyanobacteria, Alteromonas macleodii, bacterium
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Salmonella enterica
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Cupriavidus necator H16
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Cupriavidus necator
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Electron
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Desulfovibrio fructosivorans
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Cupriavidus necator
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Desulfovibrio fructosivorans
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Desulfovibrio vulgaris
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Desulfovibrio vulgaris str. Hildenborough
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Desulfovibrio vulgaris str. 'Miyazaki F'
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Cupriavidus necator
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Clostridium pasteurianum, Electron
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Desulfovibrio vulgaris str. 'Miyazaki F'
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Chlamydomonas reinhardtii
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Electron
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Desulfovibrio desulfuricans
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Electron
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Clostridium acetobutylicum, Electron
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Chlamydomonas reinhardtii
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Desulfovibrio vulgaris str. 'Miyazaki F'
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Chlamydomonas reinhardtii
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Cupriavidus necator
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Cysteine SH and Glutamate COOH Contributions to [NiFe] Hydrogenase Proton Transfer Revealed by Highly Sensitive FTIR Spectroscopy.
Angew Chem Int Ed Engl
58
13285-13290
2019
Electron
Sanchez, MLK; Sommer, C; Reijerse, E; Birrell, JA; Lubitz, W; Dyer, RB
Investigating the Kinetic Competency of CrHydA1 [FeFe] Hydrogenase Intermediate States via Time-Resolved Infrared Spectroscopy.
J Am Chem Soc
2019
Chlamydomonas reinhardtii
Chongdar, N; Pawlak, K; Rüdiger, O; Reijerse, EJ; Rodríguez-Maciá, P; Lubitz, W; Birrell, JA; Ogata, H
Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase.
J Biol Inorg Chem
25
135-149
2020
Thermotoga maritima
Oughli, AA; Hardt, S; Rüdiger, O; Birrell, JA; Plumeré, N
Reactivation of sulfide-protected [FeFe] hydrogenase in a redox-active hydrogel.
Chem Commun (Camb)
56
9958-9961
2020
Desulfovibrio desulfuricans
Zacarias, S; Temporão, A; Carpentier, P; van der Linden, P; Pereira, IAC; Matias, PM
Exploring the gas access routes in a [NiFeSe] hydrogenase using crystals pressurized with krypton and oxygen.
J Biol Inorg Chem
25
863-874
2020
Desulfovibrio vulgaris str. Hildenborough
Felbek, C; Hardt, S; Papini, C; Pramanik, D; Artero, V; Fontecave, M; Fourmond, V; Plumeré, N; Léger, C
Artificial maturation of [FeFe] hydrogenase in a redox polymer film.
Chem Commun (Camb)
57
1750-1753
2021
insertion sequences, Electron
Pelmenschikov, V; Birrell, JA; Gee, LB; Richers, CP; Reijerse, EJ; Wang, H; Arragain, S; Mishra, N; Yoda, Y; Matsuura, H; Li, L; Tamasaku, K; Rauchfuss, TB; Lubitz, W; Cramer, SP
Vibrational Perturbation of the [FeFe] Hydrogenase H-Cluster Revealed by 13C2H-ADT Labeling.
J Am Chem Soc
143
8237-8243
2021
Chlamydomonas reinhardtii
Caserta, G; Pelmenschikov, V; Lorent, C; Tadjoung Waffo, AF; Katz, S; Lauterbach, L; Schoknecht, J; Wang, H; Yoda, Y; Tamasaku, K; Kaupp, M; Hildebrandt, P; Lenz, O; Cramer, SP; Zebger, I
Hydroxy-bridged resting states of a [NiFe]-hydrogenase unraveled by cryogenic vibrational spectroscopy and DFT computations.
Chem Sci
12
2189-2197
2020
Cupriavidus necator
Shomura, Y; Yoon, KS; Nishihara, H; Higuchi, Y
Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase.
Nature
479
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2011
Bacteria
Rouvre, I; Gauquelin, C; Meynial-Salles, I; Basseguy, R
Impact of the chemicals, essential for the purification process of strict Fe-hydrogenase, on the corrosion of mild steel.
Bioelectrochemistry
109
9-23
2016
Clostridium acetobutylicum
Ratzloff, MW; Artz, JH; Mulder, DW; Collins, RT; Furtak, TE; King, PW
CO-Bridged H-Cluster Intermediates in the Catalytic Mechanism of [FeFe]-Hydrogenase CaI.
J Am Chem Soc
140
7623-7628
2018
Clostridium acetobutylicum, Chlamydomonas reinhardtii
Xu, SY; He, PQ; Dewi, SZ; Zhang, XL; Ekowati, C; Liu, TJ; Huang, XH
Hydrogen-producing microflora and fe-fe hydrogenase diversities in seaweed bed associated with marine hot springs of kalianda, indonesia.
Curr Microbiol
66
499-506
2013
Sargassum sp.
Siebert, E; Rippers, Y; Frielingsdorf, S; Fritsch, J; Schmidt, A; Kalms, J; Katz, S; Lenz, O; Scheerer, P; Paasche, L; Pelmenschikov, V; Kuhlmann, U; Mroginski, MA; Zebger, I; Hildebrandt, P
Resonance Raman Spectroscopic Analysis of the [NiFe] Active Site and the Proximal [4Fe-3S] Cluster of an O2-Tolerant Membrane-Bound Hydrogenase in the Crystalline State.
J Phys Chem B
119
13785-96
2015
Ralstonia
Sokol, KP; Robinson, WE; Oliveira, AR; Zacarias, S; Lee, CY; Madden, C; Bassegoda, A; Hirst, J; Pereira, IAC; Reisner, E
Reversible and Selective Interconversion of Hydrogen and Carbon Dioxide into Formate by a Semiartificial Formate Hydrogenlyase Mimic.
J Am Chem Soc
141
17498-17502
2019
Electron
Eitinger, T; Suhr, J; Moore, L; Smith, JA
Secondary transporters for nickel and cobalt ions: theme and variations.
Biometals
18
399-405
2005
Bacteria
Ballor, NR; Paulsen, I; Leadbetter, JR
Genomic Analysis Reveals Multiple [FeFe] Hydrogenases and Hydrogen Sensors Encoded by Treponemes from the H(2)-Rich Termite Gut.
Microb Ecol
2011
metagenome, termite gut metagenome
Akutsu, H; Takayama, Y
Functional roles of the heme architecture and its environment in tetraheme cytochrome c.
Acc Chem Res
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171-8
2007
Electron
Bianco, P; Haladjian, J; Bruschi, M; Guerlesquin, F
Reactivity of [Fe] and [Ni-Fe-Se] hydrogenases with their oxido-reduction partner: the tetraheme cytochrome c3.
Biochem Biophys Res Commun
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1992
Desulfovibrio vulgaris str. Hildenborough
Menon, NK; Robbins, J; Der Vartanian, M; Patil, D; Peck, HD; Menon, AL; Robson, RL; Przybyla, AE
Carboxy-terminal processing of the large subunit of [NiFe] hydrogenases.
FEBS Lett
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1993
Desulfovibrio gigas
Maier, T; Drapal, N; Thanbichler, M; Böck, A
Strep-tag II affinity purification: an approach to study intermediates of metalloenzyme biosynthesis.
Anal Biochem
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Escherichia coli
Pierik, AJ; Roseboom, W; Happe, RP; Bagley, KA; Albracht, SP
Carbon monoxide and cyanide as intrinsic ligands to iron in the active site of [NiFe]-hydrogenases. NiFe(CN)2CO, Biology's way to activate H2.
J Biol Chem
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Desulfovibrio vulgaris, Chromatium
De Lacey, AL; Pardo, A; Fernández, VM; Dementin, S; Adryanczyk-Perrier, G; Hatchikian, EC; Rousset, M
FTIR spectroelectrochemical study of the activation and inactivation processes of [NiFe] hydrogenases: effects of solvent isotope replacement and site-directed mutagenesis.
J Biol Inorg Chem
9
636-42
2004
Desulfovibrio fructosivorans
Böck, A; King, PW; Blokesch, M; Posewitz, MC
Maturation of hydrogenases.
Adv Microb Physiol
51
1-71
2006
Escherichia coli
Abdullatypov, AV; Tsygankov, AA
Modeling three-dimensional structure of two closely related Ni-Fe hydrogenases.
Photosynth Res
2015
Desulfovibrio vulgaris, Allochromatium vinosum
Schiffels, J; Selmer, T
A flexible toolbox to study protein-assisted metalloenzyme assembly in vitro.
Biotechnol Bioeng
112
2360-72
2015
Cupriavidus necator
Jordan, PC; Patterson, DP; Saboda, KN; Edwards, EJ; Miettinen, HM; Basu, G; Thielges, MC; Douglas, T
Self-assembling biomolecular catalysts for hydrogen production.
Nat Chem
8
179-85
2016
Salmonella virus P22
Duraffourg, N; Leprince, M; Crouzy, S; Hamelin, O; Usson, Y; Signor, L; Cavazza, C; Forge, V; Albertin, L
Hybrid Amyloid-Based Redox Hydrogel for Bioelectrocatalytic H2 Oxidation.
Angew Chem Int Ed Engl
60
14488-14497
2021
Electron
Jones, AK; Sillery, E; Albracht, SP; Armstrong, FA
Direct comparison of the electrocatalytic oxidation of hydrogen by an enzyme and a platinum catalyst.
Chem Commun (Camb)
866-7
2002
Allochromatium vinosum
Jack, RL; Dubini, A; Palmer, T; Sargent, F
Common principles in the biosynthesis of diverse enzymes.
Biochem Soc Trans
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105-7
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Escherichia coli
Volbeda, A; Martin, L; Cavazza, C; Matho, M; Faber, BW; Roseboom, W; Albracht, SP; Garcin, E; Rousset, M; Fontecilla-Camps, JC
Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases.
J Biol Inorg Chem
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239-49
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Desulfovibrio fructosivorans
Vincent, KA; Armstrong, FA
Investigating metalloenzyme reactions using electrochemical sweeps and steps: fine control and measurements with reactants ranging from ions to gases.
Inorg Chem
44
798-809
2005
Allochromatium vinosum
Melis, A; Happe, T
Trails of green alga hydrogen research - from hans gaffron to new frontiers.
Photosynth Res
80
401-9
2004
Chlorophyta
Greco, C; Bruschi, M; De Gioia, L; Ryde, U
A QM/MM investigation of the activation and catalytic mechanism of Fe-only hydrogenases.
Inorg Chem
46
5911-21
2007
Desulfovibrio desulfuricans
Rakowski DuBois, M; DuBois, DL
The roles of the first and second coordination spheres in the design of molecular catalysts for H2 production and oxidation.
Chem Soc Rev
38
62-72
2009
Areas
Ogata, H; Lubitz, W; Higuchi, Y
[NiFe] hydrogenases: structural and spectroscopic studies of the reaction mechanism.
Dalton Trans
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2009
Desulfovibrio vulgaris str. 'Miyazaki F', bacterium
Stripp, ST; Goldet, G; Brandmayr, C; Sanganas, O; Vincent, KA; Haumann, M; Armstrong, FA; Happe, T
How oxygen attacks [FeFe] hydrogenases from photosynthetic organisms.
Proc Natl Acad Sci U S A
106
17331-6
2009
Chlorophyta, Chlamydomonas reinhardtii
Calusinska, M; Happe, T; Joris, B; Wilmotte, A
The surprising diversity of clostridial hydrogenases: a comparative genomic perspective.
Microbiology
2010
Bacteria, Archaea
Yang, H; Gandhi, H; Shi, L; Kreuzer, HW; Ostrom, NE; Hegg, EL
Using gas chromatography/isotope ratio mass spectrometry to determine the fractionation factor for H2 production by hydrogenases.
Rapid Commun Mass Spectrom
26
61-8
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Desulfovibrio fructosivorans
Brazelton, WJ; Nelson, B; Schrenk, MO
Metagenomic evidence for h(2) oxidation and h(2) production by serpentinite-hosted subsurface microbial communities.
Front Microbiol
2
268
2012
Betaproteobacteria, Burkholderiales
Baltazar, CS; Teixeira, VH; Soares, CM
Structural features of [NiFeSe] and [NiFe] hydrogenases determining their different properties: a computational approach.
J Biol Inorg Chem
2012
Desulfomicrobium baculatum, Desulfovibrio gigas, Dosidicus gigas
Fritsch, J; Lenz, O; Friedrich, B
Structure, function and biosynthesis of O?-tolerant hydrogenases.
Nat Rev Microbiol
11
106-14
2013
Bacteria
Hamon, C; Ciaccafava, A; Infossi, P; Puppo, R; Even-Hernandez, P; Lojou, E; Marchi, V
Synthesis and enzymatic photo-activity of an O2 tolerant hydrogenase-CdSe@CdS quantum rod bioconjugate.
Chem Commun (Camb)
2014
Aquifex aeolicus, bacterium
Evans, RM; Armstrong, FA
Electrochemistry of Metalloproteins: Protein Film Electrochemistry for the Study of E. coli [NiFe]-Hydrogenase-1.
Methods Mol Biol
1122
73-94
2014
Escherichia coli
Hou, K; Poh, HT; Fan, WY
Electrocatalytic hydrogen generation by a trithiolato-bridged dimanganese hexacarbonyl anion with a turnover frequency exceeding 40,000 s(-1).
Chem Commun (Camb)
50
6630-2
2014
Ursidae
Adamska-Venkatesh, A; Krawietz, D; Siebel, J; Weber, K; Happe, T; Reijerse, E; Lubitz, W
New redox states observed in [FeFe] hydrogenases reveal redox coupling within the H-cluster.
J Am Chem Soc
136
11339-46
2014
Chlamydomonas reinhardtii
Stiebritz, MT
MetREx: A protein design approach for the exploration of sequence-reactivity relationships in metalloenzymes.
J Comput Chem
36
553-63
2015
Desulfovibrio desulfuricans
Khanna, N; Lindblad, P
Cyanobacterial hydrogenases and hydrogen metabolism revisited: recent progress and future prospects.
Int J Mol Sci
16
10537-61
2015
Cyanobacteria
Noji, T; Kondo, M; Jin, T; Yazawa, T; Osuka, H; Higuchi, Y; Nango, M; Itoh, S; Dewa, T
Light-Driven Hydrogen Production by Hydrogenases and a Ru-Complex inside a Nanoporous Glass Plate under Aerobic External Conditions.
J Phys Chem Lett
5
2402-7
2014
Desulfovibrio vulgaris str. 'Miyazaki F', Electron
Hunt, NT; Wright, JA; Pickett, C
Detection of Transient Intermediates Generated from Subsite Analogues of [FeFe] Hydrogenases.
Inorg Chem
55
399-410
2016
Electron
Sommer, C; Adamska-Venkatesh, A; Pawlak, K; Birrell, JA; Rüdiger, O; Reijerse, EJ; Lubitz, W
Proton Coupled Electronic Rearrangement within the H-Cluster as an Essential Step in the Catalytic Cycle of [FeFe] Hydrogenases.
J Am Chem Soc
139
1440-1443
2017
Chlamydomonas reinhardtii
Rodríguez-Maciá, P; Pawlak, K; Rüdiger, O; Reijerse, EJ; Lubitz, W; Birrell, JA
Inter-cluster Redox Coupling Influences Protonation at the H-cluster in [FeFe] Hydrogenases.
J Am Chem Soc
2017
Desulfovibrio desulfuricans
Ghosh, S
Copper and palladium nanostructures: a bacteriogenic approach.
Appl Microbiol Biotechnol
2018
Escherichia coli
Rodríguez-Maciá, P; Reijerse, EJ; van Gastel, M; DeBeer, S; Lubitz, W; Rüdiger, O; Birrell, JA
Sulfide Protects [FeFe] Hydrogenases From O2.
J Am Chem Soc
140
9346-9350
2018
Desulfovibrio desulfuricans, Chlamydomonas reinhardtii
Schwarz, FM; Schuchmann, K; Müller, V
Hydrogenation of CO2 at ambient pressure catalyzed by a highly active thermostable biocatalyst.
Biotechnol Biofuels
11
237
2018
Thermoanaerobacter kivui
Kawahara-Nakagawa, Y; Nishikawa, K; Nakashima, S; Inoue, S; Ohta, T; Ogura, T; Shigeta, Y; Fukutani, K; Yagi, T; Higuchi, Y
New assay method based on Raman spectroscopy for enzymes reacting with gaseous substrates.
Protein Sci
28
663-670
2019
Desulfovibrio vulgaris str. 'Miyazaki F'
Ilina, Y; Lorent, C; Katz, S; Jeoung, JH; Shima, S; Horch, M; Zebger, I; Dobbek, H
X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew Chem Int Ed Engl
58
18710-18714
2019
Methanosarcina barkeri
Losey, NA; Poudel, S; Boyd, ES; McInerney, MJ
The Beta Subunit of Non-bifurcating NADH-Dependent [FeFe]-Hydrogenases Differs From Those of Multimeric Electron-Bifurcating [FeFe]-Hydrogenases.
Front Microbiol
11
1109
2020
Syntrophomonas wolfei, Syntrophus aciditrophicus
Picone, N; Hogendoorn, C; Cremers, G; Poghosyan, L; Pol, A; van Alen, TA; Gagliano, AL; D'Alessandro, W; Quatrini, P; Jetten, MSM; Op den Camp, HJM; Berben, T
Geothermal Gases Shape the Microbial Community of the Volcanic Soil of Pantelleria, Italy.
mSystems
5
2020
Electron
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